RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 NLRP4Q96MN2 994 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 PPP1R16BQ96T49 567 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 RXFP1Q9HBX9 757 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 ITGB1BP2Q9UKP3 347 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 RBMX2Q9Y388 322 aaKnown RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 ABLIM1O14639 778 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 CST8O60676 142 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 LSM8O95777 96 aaKnown RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 IL9RQ01113 521 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 SLC25A11Q02978 314 aaKnown RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 MORF4L2Q15014 288 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 CPXM1Q96SM3 734 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 NRBP2Q9NSY0 501 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 KLHL14Q9P2G3 628 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 CPSF3Q9UKF6 684 aaKnown RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 CLUHO75153 1309 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 ZBTB42B2RXF5 422 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 APOEP02649 317 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 PGK2P07205 417 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 CA4P22748 312 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 GEMIN4P57678 1058 aaKnown RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 LACTBP83111 547 aaPredicted RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 PIGHQ14442 188 aaPredicted RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 SGSM1Q2NKQ1 1148 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 RAB6CQ53S08 254 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 TMTC4Q5T4D3 741 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 EEF1DP3Q658K8 133 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 DRICH1Q6PGQ1 229 aaPredicted RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 ZPBP2Q6X784 338 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 DPH6Q7L8W6 267 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 PAF1Q8N7H5 531 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 DNERQ8NFT8 737 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 DENND1AQ8TEH3 1009 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 TRAPPC9Q96Q05 1148 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 TWNKQ96RR1 684 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 KLF6Q99612 283 aaPredicted RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 SPOCK3Q9BQ16 436 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 MIS12Q9H081 205 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 RAB6CQ9H0N0 254 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 METTL5Q9NRN9 209 aaKnown RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 PHTF1Q9UMS5 762 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 DNAH12Q6ZR08 3092 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 GOLGA8RI6L899 631 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 OGTO15294 1046 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 ITGAVP06756 1048 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 CXCL8P10145 99 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 KRT3P12035 628 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 SERPINB3P29508 390 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 RAD23BP54727 409 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 CYTH1Q15438 398 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 HIF1AQ16665 826 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 CCDC142Q17RM4 750 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 LRRC38Q5VT99 294 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 APLFQ8IW19 511 aaPredicted RBP11.74□□□□□ -0.53
PDE6B-201ENST00000255622 ANKRD13AQ8IZ07 590 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 SLC35B2Q8TB61 432 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 NKD2Q969F2 451 aaPredicted RBP11.74□□□□□ -0.53
PDE6B-201ENST00000255622 PPP2R3CQ969Q6 453 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 DNAJC1Q96KC8 554 aaKnown RBP11.74□□□□□ -0.53
PDE6B-201ENST00000255622 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 SDCBP2Q9H190 292 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 MYLK2Q9H1R3 596 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 COMMD8Q9NX08 183 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 ACTL7BQ9Y614 415 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 WDR91A4D1P6 747 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 CFAP73A6NFT4 308 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 KRT4P19013 534 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 CD97P48960 835 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 CENPUQ71F23 418 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 UNC45BQ8IWX7 931 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 CPT1BQ92523 772 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 HSPH1Q92598 858 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 SMC6Q96SB8 1091 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 TPK1Q9H3S4 243 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 MINDY3Q9H8M7 445 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 PCDH9Q9HC56 1237 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 KLHL42Q9P2K6 505 aa11.74□□□□□ -0.53
PDE6B-201ENST00000255622 DRG1Q9Y295 367 aaKnown RBP11.74□□□□□ -0.53
PDE6B-201ENST00000255622 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
PDE6B-201ENST00000255622 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 ALOX15BO15296 676 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 MTRF1O75570 445 aaKnown RBP11.73□□□□□ -0.53
PDE6B-201ENST00000255622 ERBB2P04626 1255 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 IQCF3P0C7M6 154 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 MZF1P28698 734 aaPredicted RBP11.73□□□□□ -0.53
PDE6B-201ENST00000255622 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
PDE6B-201ENST00000255622 MAPK6Q16659 721 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 CNPY1Q3B7I2 92 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 SH3PXD2AQ5TCZ1 1133 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
PDE6B-201ENST00000255622 SMYD3Q9H7B4 428 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 KIAA1257Q9ULG3 409 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 ZMYND8Q9ULU4 1186 aaPredicted RBP11.73□□□□□ -0.53
PDE6B-201ENST00000255622 SPECC1L-ADORA2AF8WAN1 911 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 H0Y3Z8 333 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 TMEM63AO94886 807 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 FBXO21O94952 628 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 ITGA2BP08514 1039 aa11.73□□□□□ -0.53
PDE6B-201ENST00000255622 ZNF268Q14587 947 aaPredicted RBP11.73□□□□□ -0.53
PDE6B-201ENST00000255622 MUM1Q2TAK8 710 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms