RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 PCDH9Q9HC56 1237 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 CHCHD3Q9NX63 227 aaKnown RBP18.82■□□□□ 0.6
EFR3A-201ENST00000254624 RECQL4O94761 1208 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 MYL4P12829 197 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 PPP3CCP48454 512 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 BHMTQ93088 406 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 LZTS3O60299 673 aaPredicted RBP18.82■□□□□ 0.6
EFR3A-201ENST00000254624 RETSATQ6NUM9 610 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 ACAT1P24752 427 aaKnown RBP18.82■□□□□ 0.6
EFR3A-201ENST00000254624 KDSRQ06136 332 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 ZNF284Q2VY69 593 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 DEFB115Q30KQ5 88 aa18.82■□□□□ 0.6
EFR3A-201ENST00000254624 JCHAINP01591 159 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 KLRC2P26717 231 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 PPP1R36Q96LQ0 422 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 KLF6Q99612 283 aaPredicted RBP18.81■□□□□ 0.6
EFR3A-201ENST00000254624 FICDQ9BVA6 458 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 THG1LQ9NWX6 298 aaKnown RBP18.81■□□□□ 0.6
EFR3A-201ENST00000254624 WWOXQ9NZC7 414 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 ROBO3Q96MS0 1386 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 XYLBO75191 536 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 CHI3L2Q15782 390 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 TMCO4Q5TGY1 634 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 PRPF18Q99633 342 aaKnown RBP18.81■□□□□ 0.6
EFR3A-201ENST00000254624 GID8Q9NWU2 228 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 FBXW4P57775 412 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.81■□□□□ 0.6
EFR3A-201ENST00000254624 ICA1LQ8NDH6 482 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 SLC2A14Q8TDB8 520 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 VCLP18206 1134 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 OOSP2Q86WS3 158 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 VPS37AQ8NEZ2 397 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 FTHL17Q9BXU8 183 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 NMRK1Q9NWW6 199 aa18.81■□□□□ 0.6
EFR3A-201ENST00000254624 DNAJB2P25686 324 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 C6orf10Q5SRN2 563 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 POTEAQ6S8J7 498 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 SLC9A9Q8IVB4 645 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 TMEM121Q9BTD3 319 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 GIMAP4Q9NUV9 329 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 TRHDEQ9UKU6 1024 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 SHPRHQ149N8 1683 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 SYCE1LA8MT33 242 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 MYO1CO00159 1063 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 IGF2BP3O00425 579 aaKnown RBP eCLIP18.8■□□□□ 0.6
EFR3A-201ENST00000254624 ANKRD23Q86SG2 305 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.8■□□□□ 0.6
EFR3A-201ENST00000254624 TEKT2Q9UIF3 430 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 HACD1B0YJ81 288 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 PTENP60484 403 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 PREPLQ4J6C6 727 aaPredicted RBP18.8■□□□□ 0.6
EFR3A-201ENST00000254624 MARC1Q5VT66 337 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 C3orf20Q8ND61 904 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 COPS5Q92905 334 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 MARCOQ9UEW3 520 aaPredicted RBP18.8■□□□□ 0.6
EFR3A-201ENST00000254624 COLGALT1Q8NBJ5 622 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 TMEM161BQ8NDZ6 487 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 DCLK3Q9C098 648 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 NT5MQ9NPB1 228 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 PCDHA3Q9Y5H8 950 aa18.8■□□□□ 0.6
EFR3A-201ENST00000254624 CREMQ03060 361 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 NFIL3Q16649 462 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 ARMC2Q8NEN0 867 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 NAF1Q96HR8 494 aaKnown RBP18.79■□□□□ 0.6
EFR3A-201ENST00000254624 POPDC2Q9HBU9 364 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 SLC24A2Q9UI40 661 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 PLA2G4CQ9UP65 541 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 PJA2O43164 708 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 RAMP2O60895 175 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 FKTNO75072 461 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 KCNK10P57789 538 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 TBX2Q13207 712 aaPredicted RBP18.79■□□□□ 0.6
EFR3A-201ENST00000254624 REM2Q8IYK8 340 aaPredicted RBP18.79■□□□□ 0.6
EFR3A-201ENST00000254624 ETNPPLQ8TBG4 499 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 ACTL9Q8TC94 416 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 EDEM1Q92611 657 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 SENP8Q96LD8 212 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 CLPBQ9H078 707 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 SIGLEC1Q9BZZ2 1709 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 PHF20L1A8MW92 1017 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 CBX4O00257 560 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 ADCY6O43306 1168 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 EEF1DP29692 281 aaKnown RBP18.79■□□□□ 0.6
EFR3A-201ENST00000254624 LSP1P33241 339 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 SYTL2Q9HCH5 934 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 RNF112Q9ULX5 631 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 COL1A2P08123 1366 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 LRRC10BA6NIK2 292 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 MTM1Q13496 603 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 CBWD6Q4V339 395 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 CBWD3Q5JTY5 395 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 CBWD5Q5RIA9 395 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 NLRP9Q7RTR0 991 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 TNIP2Q8NFZ5 429 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 SPATA17Q96L03 361 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 ILKAPQ9H0C8 392 aaPredicted RBP18.79■□□□□ 0.6
EFR3A-201ENST00000254624 STN1Q9H668 368 aaKnown RBP18.79■□□□□ 0.6
EFR3A-201ENST00000254624 SHOC2Q9UQ13 582 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 FRMD3A2A2Y4 597 aa18.79■□□□□ 0.6
EFR3A-201ENST00000254624 LYPLA2O95372 231 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms