RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ASCL5Q7RTU5 278 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 FAM114A1Q8IWE2 563 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 ZNF276Q8N554 614 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 NELL1Q92832 810 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 SAMSN1Q9NSI8 373 aaKnown RBP24.13■■□□□ 1.45
LSM4-201ENST00000252816 TBC1D14Q9P2M4 693 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 DNMT3LQ9UJW3 386 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 GTPBP10A4D1E9 387 aaKnown RBP24.12■■□□□ 1.45
LSM4-201ENST00000252816 GFRA3O60609 400 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 GABBR2O75899 941 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 ZBED1O96006 694 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 KRT5P13647 590 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 DRD1P21728 446 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 PON1P27169 355 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 CXCL12P48061 93 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 ADIGQ0VDE8 80 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 CT47A1Q5JQC4 288 aaPredicted RBP24.12■■□□□ 1.45
LSM4-201ENST00000252816 MIIPQ5JXC2 388 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 SLC35F5Q8WV83 523 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 KCTD13Q8WZ19 329 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 NKD2Q969F2 451 aaPredicted RBP24.12■■□□□ 1.45
LSM4-201ENST00000252816 LRRC4Q9HBW1 653 aa24.12■■□□□ 1.45
LSM4-201ENST00000252816 WDR87Q6ZQQ6 2873 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 PRR23AA6NEV1 266 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 M0QYV0 167 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 RALAP11233 206 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 YWHAGP61981 247 aaKnown RBP eCLIP24.11■■□□□ 1.45
LSM4-201ENST00000252816 LY6G5CQ5SRR4 150 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 HTR3DQ70Z44 454 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 ENOSF1Q7L5Y1 443 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 SECISBP2LQ93073 1101 aaKnown RBP24.11■■□□□ 1.45
LSM4-201ENST00000252816 OTUB2Q96DC9 234 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 TUBGCP2Q9BSJ2 902 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 APEX2Q9UBZ4 518 aa24.11■■□□□ 1.45
LSM4-201ENST00000252816 FANCMQ8IYD8 2048 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 RNF40O75150 1001 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 PRKCSHP14314 528 aaPredicted RBP24.1■■□□□ 1.45
LSM4-201ENST00000252816 HOXC13P31276 330 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 RGS7P49802 495 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 STILQ15468 1287 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 VWA3BQ502W6 1294 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 PMF1Q6P1K2 205 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 ZC3H14Q6PJT7 736 aaKnown RBP24.1■■□□□ 1.45
LSM4-201ENST00000252816 C12orf40Q86WS4 652 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 MIB1Q86YT6 1006 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 ARHGAP18Q8N392 663 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 ZBTB44Q8NCP5 570 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 NDST4Q9H3R1 872 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 SIX2Q9NPC8 291 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 ACP6Q9NPH0 428 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 ZSCAN32Q9NX65 697 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 AJAP1Q9UKB5 411 aaPredicted RBP24.1■■□□□ 1.45
LSM4-201ENST00000252816 MYOFQ9NZM1 2061 aa24.1■■□□□ 1.45
LSM4-201ENST00000252816 BECN2A8MW95 431 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 KCNJ18B7U540 433 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 ADH1CP00326 375 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 ADH5P11766 374 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 SLC6A11P48066 632 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 MFAP3P55082 362 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 MESP2Q0VG99 397 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 EFEMP1Q12805 493 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 KCNJ12Q14500 433 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 ARHGAP44Q17R89 818 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 TADA2BQ86TJ2 420 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 ENOX1Q8TC92 643 aaKnown RBP24.09■■□□□ 1.45
LSM4-201ENST00000252816 EXOC4Q96A65 974 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 CDK5RAP1Q96SZ6 601 aaKnown RBP24.09■■□□□ 1.45
LSM4-201ENST00000252816 RASAL2Q9UJF2 1139 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 NFE2L3Q9Y4A8 694 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 PCDHGA2Q9Y5H1 932 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 RIF1Q5UIP0 2472 aaKnown RBP24.09■■□□□ 1.45
LSM4-201ENST00000252816 ATG2BQ96BY7 2078 aa24.09■■□□□ 1.45
LSM4-201ENST00000252816 K7ESF4 209 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 PIK3R2O00459 728 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 STC2O76061 302 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 PAPSS2O95340 614 aaPredicted RBP24.08■■□□□ 1.45
LSM4-201ENST00000252816 MBD3O95983 291 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 LCP1P13796 627 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 GOLGA8FQ08AF8 430 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 GOLGA8DPQ0D2H9 430 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 DPY19L2P1Q6NXN4 242 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 TMEM25Q86YD3 366 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 SIX6OS1Q8N1H7 587 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 CNGB3Q9NQW8 809 aa24.08■■□□□ 1.45
LSM4-201ENST00000252816 POLR3BQ9NW08 1133 aaPredicted RBP24.08■■□□□ 1.45
LSM4-201ENST00000252816 ANTXRLA6NF34 631 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 YJEFN3A6XGL0 299 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 E7ENQ6 273 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 DMWDQ09019 674 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 PPP2R5DQ14738 602 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 FBXO43Q4G163 708 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 TCP11X2Q5H9J9 407 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 Q6ZNB5 142 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 C11orf57Q6ZUT1 292 aaPredicted RBP24.07■■□□□ 1.44
LSM4-201ENST00000252816 RSRC2Q7L4I2 434 aaKnown RBP24.07■■□□□ 1.44
LSM4-201ENST00000252816 SFTPA1Q8IWL2 248 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 ATRIPQ8WXE1 791 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 SHC3Q92529 594 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 FAM81BQ96LP2 452 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 FAM126AQ9BYI3 521 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms