RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TPSD1Q9BZJ3 242 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 KCTD10Q9H3F6 313 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 CSNK1G1Q9HCP0 422 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 DMAP1Q9NPF5 467 aaPredicted RBP10.94□□□□□ -0.66
VPS50-201ENST00000251739 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 TBC1D14Q9P2M4 693 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 ADAMTS9Q9P2N4 1935 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 ATP8B3O60423 1300 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 WDFY3Q8IZQ1 3526 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 CKAP5Q14008 2032 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 SGK1O00141 431 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 HOXC11O43248 304 aaPredicted RBP10.93□□□□□ -0.66
VPS50-201ENST00000251739 EXOC3O60645 756 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 ADAM23O75077 832 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 KCNK5O95279 499 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 SLFN14P0C7P3 912 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 MBL2P11226 248 aaPredicted RBP10.93□□□□□ -0.66
VPS50-201ENST00000251739 ADH5P11766 374 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
VPS50-201ENST00000251739 P2RY2P41231 377 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 GRIA2P42262 883 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 AFMP43652 599 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 PGFP49763 221 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 SLC5A3P53794 718 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 SEC13P55735 322 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 CREB5Q02930 508 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 PKP1Q13835 747 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 USP39Q53GS9 565 aaKnown RBP10.93□□□□□ -0.66
VPS50-201ENST00000251739 ZNF667Q5HYK9 610 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 LY6G5CQ5SRR4 150 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 C1orf220Q5T0J3 134 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 HECTD3Q5T447 861 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 RNF43Q68DV7 783 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 BRICD5Q6PL45 260 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 CRYBG2Q8N1P7 616 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 CCDC33Q8N5R6 958 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 ALLCQ8N6M5 410 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 WBP2Q969T9 261 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 ELMO3Q96BJ8 720 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 SMARCD1Q96GM5 515 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 TNIP3Q96KP6 325 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 SMOQ99835 787 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 EDEM2Q9BV94 578 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 CCSER2Q9H7U1 834 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 KRT82Q9NSB4 513 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 COMMD8Q9NX08 183 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 HMGXB4Q9UGU5 601 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 RCOR1Q9UKL0 485 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 HCN2Q9UL51 889 aa10.93□□□□□ -0.66
VPS50-201ENST00000251739 DSPP15924 2871 aaKnown RBP10.93□□□□□ -0.66
VPS50-201ENST00000251739 SPEGQ15772 3267 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.92□□□□□ -0.66
VPS50-201ENST00000251739 PDXKO00764 312 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 CAVIN2O95810 425 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 ASS1P00966 412 aaKnown RBP10.92□□□□□ -0.66
VPS50-201ENST00000251739 TNFRSF4P43489 277 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 ASPAP45381 313 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 ME1P48163 572 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 DLG4P78352 724 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 KDSRQ06136 332 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 INCA1Q0VD86 236 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 IFRD2Q12894 506 aaPredicted RBP10.92□□□□□ -0.66
VPS50-201ENST00000251739 BIRC3Q13489 604 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 FOXD4L5Q5VV16 416 aaPredicted RBP10.92□□□□□ -0.66
VPS50-201ENST00000251739 SCARA5Q6ZMJ2 495 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 TXNDC5Q8NBS9 432 aaKnown RBP10.92□□□□□ -0.66
VPS50-201ENST00000251739 FOXD4L4Q8WXT5 416 aaPredicted RBP10.92□□□□□ -0.66
VPS50-201ENST00000251739 TAF4BQ92750 862 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 CD248Q9HCU0 757 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 ARHGEF4Q9NR80 690 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 FAM13BQ9NYF5 915 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 GMIPQ9P107 970 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 SERTAD1Q9UHV2 236 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 ANGPTL2Q9UKU9 493 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 WASF3Q9UPY6 502 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 INVSQ9Y283 1065 aa10.92□□□□□ -0.66
VPS50-201ENST00000251739 KNL1Q8NG31 2342 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 PATE3B3GLJ2 98 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 HHLA1C9JL84 531 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 CDX4O14627 284 aaPredicted RBP10.91□□□□□ -0.66
VPS50-201ENST00000251739 IKBKBO14920 756 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 PHACTR2O75167 634 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 TULP3O75386 442 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 AP1G2O75843 785 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 BEST1O76090 585 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 KLF8O95600 359 aaPredicted RBP10.91□□□□□ -0.66
VPS50-201ENST00000251739 ADH1BP00325 375 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 ABL1P00519 1130 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 NR3C1P04150 777 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 RPN1P04843 607 aaKnown RBP10.91□□□□□ -0.66
VPS50-201ENST00000251739 APODP05090 189 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 CCDC130P13994 396 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 GBP1P32455 592 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 MCCD1P59942 119 aaPredicted RBP10.91□□□□□ -0.66
VPS50-201ENST00000251739 ST3GAL2Q16842 350 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 MAP7D1Q3KQU3 841 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 EMC10Q5UCC4 262 aa10.91□□□□□ -0.66
VPS50-201ENST00000251739 PEAR1Q5VY43 1037 aaPredicted RBP10.91□□□□□ -0.66
VPS50-201ENST00000251739 SV2AQ7L0J3 742 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms