RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 NOD2Q9HC29 1040 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 ARHGEF3Q9NR81 526 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 BAIAP2L1Q9UHR4 511 aa20.32■□□□□ 0.84
CDC42EP1-201ENST00000249014 BCLAF3A2AJT9 711 aaKnown RBP20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 ZBED1O96006 694 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 KRT16P08779 473 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 CCDC130P13994 396 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 CCNB1P14635 433 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 AKAP5P24588 427 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 PTK7Q13308 1070 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 LRRC52Q8N7C0 313 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 BEST2Q8NFU1 509 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 C10orf82Q8WW14 230 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 SERAC1Q96JX3 654 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 ZNF670Q9BS34 389 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 C11orf84Q9BUA3 381 aaPredicted RBP20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 ZNF408Q9H9D4 720 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 MORF4L1Q9UBU8 362 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 USH1CQ9Y6N9 552 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 CCL15-CCL14A0A0B4J2E2 113 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 A8MXQ7 604 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 RECQL4O94761 1208 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 C1QAP02745 245 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 PDGFRBP09619 1106 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 ZNF200P98182 395 aaPredicted RBP20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 GRB14Q14449 540 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 CCL15Q16663 113 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 ARHGAP17Q68EM7 881 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 CAND1Q86VP6 1230 aaKnown RBP20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 CCDC110Q8TBZ0 833 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 MAGEC3Q8TD91 643 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 STK32AQ8WU08 396 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 KBTBD7Q8WVZ9 684 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 BRI3BPQ8WY22 251 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 APOL6Q9BWW8 343 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 NRDE2Q9H7Z3 1164 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 CYLDQ9NQC7 956 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 ETNK2Q9NVF9 386 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 CNTN3Q9P232 1028 aa20.31■□□□□ 0.84
CDC42EP1-201ENST00000249014 TM9SF1O15321 606 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 UNC5CO95185 931 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 CYP2F1P24903 491 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 LMO2P25791 158 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 ADORA2BP29275 332 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 FAAP100Q0VG06 881 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 CBLBQ13191 982 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 NOTUMQ6P988 496 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 UNC93AQ86WB7 457 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 ERP27Q96DN0 273 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 CFAP36Q96G28 342 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 TINF2Q9BSI4 451 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 ABHD16BQ9H3Z7 469 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 PLAC1Q9HBJ0 212 aa20.3■□□□□ 0.84
CDC42EP1-201ENST00000249014 CFAP69A5D8W1 941 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 L1CAMP32004 1257 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 SLC10A2Q12908 348 aaPredicted RBP20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 RIPK1Q13546 671 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 ZNF618Q5T7W0 954 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 SH2D5Q6ZV89 423 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 VSIG1Q86XK7 387 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 ZDHHC17Q8IUH5 632 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 NPLOC4Q8TAT6 608 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 ALKBH8Q96BT7 664 aaKnown RBP20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 ETNK1Q9HBU6 452 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 TTLL3Q9Y4R7 772 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 IQANK1A0A1B0GTG1 560 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 SPTLC1O15269 473 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 FAM155BO75949 473 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 MT-ND3P03897 115 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 APRTP07741 180 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 GBE1Q04446 702 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 HIC1Q14526 733 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 SEPT7Q16181 437 aaKnown RBP20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 CCDC33Q8N5R6 958 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 PTPRN2Q92932 1015 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 POPDC2Q9HBU9 364 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 KLK14Q9P0G3 267 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 SLC45A1Q9Y2W3 748 aa20.29■□□□□ 0.84
CDC42EP1-201ENST00000249014 RRN3P2A6NIE6 340 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 INHBAP08476 426 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 SMIM10L2AP0DMW4 78 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 SMIM10L2BP0DMW5 78 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 LCP1P13796 627 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 SKIV2L2P42285 1042 aaKnown RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 PTPN9P43378 593 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 DPYSL2Q16555 572 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 SLC26A9Q7LBE3 791 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 APBB1IPQ7Z5R6 666 aaPredicted RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 CENPIQ92674 756 aaPredicted RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 LRRC37BQ96QE4 947 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 KLC2Q9H0B6 622 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 DHX35Q9H5Z1 703 aaKnown RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 SPON1Q9HCB6 807 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 ALG13Q9NP73 1137 aaKnown RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 PNPLA8Q9NP80 782 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 MTMR10Q9NXD2 777 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 IKBKGQ9Y6K9 419 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 PIRO00625 290 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 LPXNO60711 386 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 SPAG6O75602 509 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms