RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 KDSRQ06136 332 aa22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 BST2Q10589 180 aaKnown RBP22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 TPD52L1Q16890 204 aaPredicted RBP22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 LY6G5CQ5SRR4 150 aa22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 TADA2BQ86TJ2 420 aa22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 MIB1Q86YT6 1006 aa22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 EHBP1Q8NDI1 1231 aa22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 OTUB2Q96DC9 234 aa22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 KLF16Q9BXK1 252 aaPredicted RBP22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 EPC1Q9H2F5 836 aa22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 POLR3BQ9NW08 1133 aaPredicted RBP22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 DNMT3LQ9UJW3 386 aa22.23■■□□□ 1.15
HCFC1R1-201ENST00000248089 O00370 1275 aa22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 BRD2P25440 801 aaKnown RBP22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 RAB41Q5JT25 222 aa22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 C12orf40Q86WS4 652 aa22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 RBBP8NLQ8NC74 664 aaPredicted RBP22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 UBXN6Q9BZV1 441 aa22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 LRRC4Q9HBW1 653 aa22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 NCDNQ9UBB6 729 aa22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 RASAL2Q9UJF2 1139 aa22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 KIAA1257Q9ULG3 409 aa22.22■■□□□ 1.15
HCFC1R1-201ENST00000248089 EML5Q05BV3 1969 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 CALCAP01258 141 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 PAEPP09466 180 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 SLC6A11P48066 632 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 PXNP49023 591 aaPredicted RBP22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 YWHAGP61981 247 aaKnown RBP eCLIP22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 GCNT1Q02742 428 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 ADIGQ0VDE8 80 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 EFEMP1Q12805 493 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 LPAL2Q16609 132 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 ANO4Q32M45 955 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 DPCR1Q3MIW9 517 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 BTBD8Q5XKL5 378 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 KLHDC10Q6PID8 442 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 PRR23BQ6ZRT6 265 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 RSRC2Q7L4I2 434 aaKnown RBP22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 LONP2Q86WA8 852 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 ARHGAP18Q8N392 663 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 TFAP2BQ92481 460 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 RUBCNQ92622 972 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 MED15Q96RN5 788 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 CDK5RAP1Q96SZ6 601 aaKnown RBP22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 CRACR2AQ9BSW2 395 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 ULBP1Q9BZM6 244 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 CLIC5Q9NZA1 410 aa22.21■■□□□ 1.15
HCFC1R1-201ENST00000248089 GPR179Q6PRD1 2367 aa22.2■■□□□ 1.15
HCFC1R1-201ENST00000248089 M0QYV0 167 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 RNF225M0QZC1 329 aaPredicted RBP22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 ZBED1O96006 694 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 HMBSP08397 361 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 SETSIPP0DME0 302 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 KRT5P13647 590 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 GAD2Q05329 585 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 SRSF5Q13243 272 aaKnown RBP22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 HTR3DQ70Z44 454 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 SIX6OS1Q8N1H7 587 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 NAT16Q8N8M0 369 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 NDRG1Q92597 394 aaKnown RBP22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 ACDQ96AP0 544 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 KREMEN1Q96MU8 473 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 IPO9Q96P70 1041 aaKnown RBP22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 HHIPQ96QV1 700 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 PNKPQ96T60 521 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 SPHK2Q9NRA0 654 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 LMBRD1Q9NUN5 540 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 RAB23Q9ULC3 237 aa22.2■■□□□ 1.14
HCFC1R1-201ENST00000248089 K7EQS6 105 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 APODP05090 189 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 MTIF2P46199 727 aaKnown RBP22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 PLA2G4AP47712 749 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 MESP2Q0VG99 397 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 C2orf27AQ580R0 203 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 LCLAT1Q6UWP7 414 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 CLEC17AQ6ZS10 378 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 TMEM25Q86YD3 366 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 SFTPA1Q8IWL2 248 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 DCLK2Q8N568 766 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 SECISBP2LQ93073 1101 aaKnown RBP22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 GBP4Q96PP9 640 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 UBE2TQ9NPD8 197 aaPredicted RBP22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 ARHGEF4Q9NR80 690 aa22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.19■■□□□ 1.14
HCFC1R1-201ENST00000248089 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 PIK3R2O00459 728 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 KAT7O95251 611 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 LCP1P13796 627 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 EIF2DP41214 584 aaKnown RBP22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 RGS7P49802 495 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 TPGS1Q6ZTW0 290 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 WDR5BQ86VZ2 330 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 CCDC26Q8TAB7 109 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 ZSWIM1Q9BR11 485 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 DACH1Q9UI36 760 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 SPAG17Q6Q759 2223 aa22.18■■□□□ 1.14
HCFC1R1-201ENST00000248089 DMXL1Q9Y485 3027 aa22.17■■□□□ 1.14
HCFC1R1-201ENST00000248089 SPTBN4Q9H254 2564 aa22.17■■□□□ 1.14
HCFC1R1-201ENST00000248089 ANTXRLA6NF34 631 aa22.17■■□□□ 1.14
HCFC1R1-201ENST00000248089 NEDD8-MDP1E9PL57 170 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms