RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 POU5F1BQ06416 359 aa14.96□□□□□ -0.01
HIF3A-202ENST00000244303 GOLGA7BQ2TAP0 167 aa14.96□□□□□ -0.01
HIF3A-202ENST00000244303 MAMDC4Q6UXC1 1216 aa14.96□□□□□ -0.01
HIF3A-202ENST00000244303 MAP7D3Q8IWC1 876 aa14.96□□□□□ -0.01
HIF3A-202ENST00000244303 PQLC3Q8N755 202 aa14.96□□□□□ -0.01
HIF3A-202ENST00000244303 NT5C1AQ9BXI3 368 aa14.96□□□□□ -0.01
HIF3A-202ENST00000244303 ITGA11Q9UKX5 1188 aa14.96□□□□□ -0.01
HIF3A-202ENST00000244303 TTLL3Q9Y4R7 772 aa14.96□□□□□ -0.01
HIF3A-202ENST00000244303 TRAFD1O14545 582 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-202ENST00000244303 APOL1O14791 398 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 C1QAP02745 245 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 ADORA2AP29274 412 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 CCNA1P78396 465 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PDK2Q15119 407 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 CA9Q16790 459 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PPP1R26Q5T8A7 1209 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PMF1Q6P1K2 205 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 CHSY1Q86X52 802 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 GTF3C2Q8WUA4 911 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-202ENST00000244303 FAM172AQ8WUF8 416 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 ZNF570Q96NI8 536 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PCDH18Q9HCL0 1135 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PNPLA8Q9NP80 782 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 BATF3Q9NR55 127 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 NKX1-2Q9UD57 310 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PDHXO00330 501 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 ZBED1O96006 694 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 NEFHP12036 1026 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 BGNP21810 368 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 TGM2P21980 687 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PTPN4P29074 926 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 BCAR1P56945 870 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 RBP5P82980 135 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PRKD1Q15139 912 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-202ENST00000244303 OLFML1Q6UWY5 402 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 IFNLR1Q8IU57 520 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-202ENST00000244303 CTAGE3PQ8IX95 158 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 LINC01465Q8N7H1 131 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PPM1NQ8N819 430 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PCDH19Q8TAB3 1148 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 RTP4Q96DX8 246 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 SNRNP25Q9BV90 132 aaKnown RBP14.95□□□□□ -0.02
HIF3A-202ENST00000244303 MIS12Q9H081 205 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 SAR1AQ9NR31 198 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 HEY2Q9UBP5 337 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 LNPEPQ9UIQ6 1025 aa14.95□□□□□ -0.02
HIF3A-202ENST00000244303 PEX11AO75192 247 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 GM2AP17900 193 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 ARFIP2P53365 341 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 BOLA3Q53S33 107 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 TTC39BQ5VTQ0 682 aaPredicted RBP14.94□□□□□ -0.02
HIF3A-202ENST00000244303 EP400NLQ6ZTU2 488 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 CAND1Q86VP6 1230 aaKnown RBP14.94□□□□□ -0.02
HIF3A-202ENST00000244303 SLC26A11Q86WA9 606 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 TTC30AQ86WT1 665 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 KCNV2Q8TDN2 545 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 AFG1LQ8WV93 481 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 ACAP3Q96P50 834 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 ZNF408Q9H9D4 720 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 KCNK13Q9HB14 408 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 POPDC2Q9HBU9 364 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 VTA1Q9NP79 307 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 ETNK2Q9NVF9 386 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 KIAA1257Q9ULG3 409 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 C2CD2Q9Y426 696 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 RBM47A0AV96 593 aaKnown RBP14.94□□□□□ -0.02
HIF3A-202ENST00000244303 GLTPD2A6NH11 291 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 CXorf49A8MYA2 514 aaPredicted RBP14.94□□□□□ -0.02
HIF3A-202ENST00000244303 TRIM49D1C9J1S8 452 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 DPYSL4O14531 572 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 APRTP07741 180 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 SDC4P31431 198 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 ANKRD20A2Q5SQ80 823 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 ANKRD20A1Q5TYW2 823 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 ANKRD20A3Q5VUR7 823 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 SLC9A4Q6AI14 798 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 CDHR3Q6ZTQ4 885 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 SCUBE3Q8IX30 993 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 NLRP7Q8WX94 980 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 KIF12Q96FN5 646 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 TMEM120AQ9BXJ8 343 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 KLC2Q9H0B6 622 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 RNPEPL1Q9HAU8 725 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 PLAC1Q9HBJ0 212 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 FAM49BQ9NUQ9 324 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 CNTN3Q9P232 1028 aa14.94□□□□□ -0.02
HIF3A-202ENST00000244303 ZC3H7BQ9UGR2 993 aaKnown RBP14.94□□□□□ -0.02
HIF3A-202ENST00000244303 BCLAF3A2AJT9 711 aaKnown RBP14.93□□□□□ -0.02
HIF3A-202ENST00000244303 CFAP69A5D8W1 941 aa14.93□□□□□ -0.02
HIF3A-202ENST00000244303 COPEO14579 308 aa14.93□□□□□ -0.02
HIF3A-202ENST00000244303 TSPAN1O60635 241 aa14.93□□□□□ -0.02
HIF3A-202ENST00000244303 SKAP2O75563 359 aaPredicted RBP14.93□□□□□ -0.02
HIF3A-202ENST00000244303 HAUS5O94927 633 aa14.93□□□□□ -0.02
HIF3A-202ENST00000244303 STAU1O95793 577 aaKnown RBP14.93□□□□□ -0.02
HIF3A-202ENST00000244303 ADCYAP1R1P41586 468 aa14.93□□□□□ -0.02
HIF3A-202ENST00000244303 PPP6R3Q5H9R7 873 aaPredicted RBP14.93□□□□□ -0.02
HIF3A-202ENST00000244303 ACOT1Q86TX2 421 aa14.93□□□□□ -0.02
HIF3A-202ENST00000244303 PPTC7Q8NI37 304 aa14.93□□□□□ -0.02
HIF3A-202ENST00000244303 CCDC110Q8TBZ0 833 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms