RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
PCDHB12-201ENST00000239450 PCED1BQ96HM7 432 aa12.17□□□□□ -0.46
PCDHB12-201ENST00000239450 SNRNP25Q9BV90 132 aaKnown RBP12.17□□□□□ -0.46
PCDHB12-201ENST00000239450 NSRP1Q9H0G5 558 aaKnown RBP12.17□□□□□ -0.46
PCDHB12-201ENST00000239450 PCYOX1Q9UHG3 505 aa12.17□□□□□ -0.46
PCDHB12-201ENST00000239450 A0A1W2PQ45 241 aaPredicted RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 A0A1W2PQY0 241 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 FOXO6A8MYZ6 492 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 BEST1O76090 585 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 ITGB1P05556 798 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 BRAFP15056 766 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 NPR3P17342 541 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CYP2C18P33260 490 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 AARSP49588 968 aaKnown RBP eCLIP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 DDR2Q16832 855 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CTXN3Q4LDR2 81 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 EFHC2Q5JST6 749 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 ZNF572Q7Z3I7 529 aaPredicted RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 ANKS4BQ8N8V4 417 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 GLIS1Q8NBF1 620 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 TMEM59LQ9UK28 342 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 PCDHGC3Q9UN70 934 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 INHBAP08476 426 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CKBP12277 381 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 HADHBP55084 474 aaKnown RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 YWHAZP63104 245 aaKnown RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CA9Q16790 459 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 ZNF280BQ86YH2 543 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 IQCKQ8N0W5 287 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 DNAAF3Q8N9W5 541 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 OLIG1Q8TAK6 271 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CCDC110Q8TBZ0 833 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 DEPDC1BQ8WUY9 529 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 TMEM209Q96SK2 561 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CNTN3Q9P232 1028 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 NENFQ9UMX5 172 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 COMMD10Q9Y6G5 202 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 HAS3O00219 553 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 MTA2O94776 668 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 RARGP13631 454 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 PECAM1P16284 738 aaPredicted RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CA4P22748 312 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CYP2F1P24903 491 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 PITX1P78337 314 aaPredicted RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CAV1Q03135 178 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 BOLA3Q53S33 107 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 C3orf58Q8NDZ4 430 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 USP6NLQ92738 828 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CELF6Q96J87 481 aaKnown RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 LRRC19Q9H756 370 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 XPO7Q9UIA9 1087 aaKnown RBP12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 Q9Y3F1 56 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 SNX10Q9Y5X0 201 aa12.16□□□□□ -0.46
PCDHB12-201ENST00000239450 CPP00450 1065 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 MSH2P43246 934 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 ZNF143P52747 638 aaPredicted RBP12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 VCPP55072 806 aaKnown RBP12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 IFI35P80217 286 aaPredicted RBP12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 ZNF252P-AS1Q0IIN9 211 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 EFHC1Q5JVL4 640 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 ANKS1BQ7Z6G8 1248 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 ATAD1Q8NBU5 361 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 KLC2Q9H0B6 622 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 LHX5Q9H2C1 402 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 A6NNZ2 444 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 DFFAO00273 331 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 SAT1P21673 171 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 LSP1P33241 339 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 MDH1P40925 334 aaKnown RBP12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 LHX1P48742 406 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 TUBB8Q3ZCM7 444 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 FAM47EQ6ZV65 393 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 HFE2Q6ZVN8 426 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 FAM35AQ86V20 835 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 C4orf33Q8N1A6 199 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 SCAMP5Q8TAC9 235 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 GIPC2Q8TF65 315 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 SMC6Q96SB8 1091 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 TMBIM4Q9HC24 238 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 KLHL8Q9P2G9 620 aaPredicted RBP12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 CTNNAL1Q9UBT7 734 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 LCMT1Q9UIC8 334 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 ADAMTS4O75173 837 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 TRUB2O95900 331 aaKnown RBP12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 EPHB2P29323 1055 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 LIG3P49916 1009 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 TPI1P60174 286 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 NOMO2Q5JPE7 1267 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 LRIG3Q6UXM1 1119 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 SYDE1Q6ZW31 735 aaPredicted RBP12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 UNC93AQ86WB7 457 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 FUKQ8N0W3 1084 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 DNAJB4Q9UDY4 337 aa12.15□□□□□ -0.46
PCDHB12-201ENST00000239450 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms