RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PCYT2Q99447 389 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 CADM1Q9BY67 442 aaKnown RBP9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 ACSS3Q9H6R3 686 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 XPO7Q9UIA9 1087 aaKnown RBP9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 LZTS1Q9Y250 596 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 ABLIM1O14639 778 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 WFS1O76024 890 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZWINTO95229 277 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 ATG7O95352 703 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 PAX3P23760 479 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 KDELR1P24390 212 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 CCNG1P51959 295 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 ARL4CP56559 192 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 R3HDM1Q15032 1099 aaKnown RBP9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 SLC45A4Q5BKX6 768 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 MARK2Q7KZI7 788 aaKnown RBP9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 TTC7BQ86TV6 843 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRIM50Q86XT4 487 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 BRSK2Q8IWQ3 736 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 ATP11CQ8NB49 1132 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 HSPH1Q92598 858 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 CPXM1Q96SM3 734 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 SHCBP1LQ9BZQ2 653 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 MANSC1Q9H8J5 431 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 TMCO1Q9UM00 188 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 E7ENQ6 273 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 MAP3K6O95382 1288 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 GJB1P08034 283 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 DPEP1P16444 411 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 ELK3P41970 407 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 DEFB132Q7Z7B7 95 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 THNSL1Q8IYQ7 743 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 FAM111AQ96PZ2 611 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 DHRS4Q9BTZ2 278 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 NIF3L1Q9GZT8 377 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 KCNK13Q9HB14 408 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 PFDN4Q9NQP4 134 aa9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 DDX56Q9NY93 547 aaKnown RBP9.77□□□□□ -0.85
HLA-DOA-201ENST00000229829 B2RBV5 119 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 ADCY3O60266 1144 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 MSCO60682 206 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 STAM2O75886 525 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 KITP10721 976 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 PTPN7P35236 360 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 ASPAP45381 313 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 PSMC1P62191 440 aaKnown RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 DSG1Q02413 1049 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 FAAP100Q0VG06 881 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 LRRC8BQ6P9F7 803 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 EEPD1Q7L9B9 569 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 NANOGNBQ7Z5D8 188 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 LRRC71Q8N4P6 559 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 TTC17Q96AE7 1141 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 HSPBAP1Q96EW2 488 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 CALN1Q9BXU9 219 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 E5RJQ4 531 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 CCDC22O60826 627 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 LSM8O95777 96 aaKnown RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 RBP3P10745 1247 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 BGNP21810 368 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 EIF4BP23588 611 aaKnown RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 PHBP35232 272 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 MED21Q13503 144 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 CDHR3Q6ZTQ4 885 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 BBS12Q6ZW61 710 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 PRPF39Q86UA1 669 aaKnown RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 RFX6Q8HWS3 928 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 APLFQ8IW19 511 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 SCUBE1Q8IWY4 988 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 TMEM192Q8IY95 271 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 NIPA2Q8N8Q9 360 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 SLC26A7Q8TE54 656 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 XYLT2Q9H1B5 865 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 SYNCQ9H7C4 482 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 MARCOQ9UEW3 520 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 HMGXB4Q9UGU5 601 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 ANGPTL2Q9UKU9 493 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 TCRBV9S1A1TA0A576 114 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 KBTBD13C9JR72 458 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 E7ESA3 106 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 LPXNO60711 386 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 PDE5AO76074 875 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 ERBB2P04626 1255 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 EIF3EP60228 445 aaKnown RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRPC3Q13507 836 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 DPYSL3Q14195 570 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 RASA2Q15283 850 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZNF699Q32M78 642 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 CCDC92Q53HC0 331 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 DPH6Q7L8W6 267 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 TMEM110Q86TL2 294 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 WDR49Q8IV35 697 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 PDIK1LQ8N165 341 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 KCTD6Q8NC69 237 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 NAT14Q8WUY8 206 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 FAM136AQ96C01 138 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 OLFM3Q96PB7 478 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 TWNKQ96RR1 684 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 TSSK1BQ9BXA7 367 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms