RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 ZDHHC7Q9NXF8 308 aa11.64□□□□□ -0.55
CTSC-201ENST00000227266 NAALADL1Q9UQQ1 740 aa11.64□□□□□ -0.55
CTSC-201ENST00000227266 COL4A4P53420 1690 aaPredicted RBP11.64□□□□□ -0.55
CTSC-201ENST00000227266 KIF5CO60282 957 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 BUB1BO60566 1050 aaPredicted RBP11.63□□□□□ -0.55
CTSC-201ENST00000227266 DAB1O75553 588 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 MTA2O94776 668 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 GLI1P08151 1106 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 PSMA2P25787 234 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 HOXA9P31269 272 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 OGDHQ02218 1023 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 TCEAL1Q15170 157 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 ZNF569Q5MCW4 686 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 TRNP1Q6NT89 227 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 TMC5Q6UXY8 1006 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 Q7L0L9 218 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 RSRC2Q7L4I2 434 aaKnown RBP11.63□□□□□ -0.55
CTSC-201ENST00000227266 DAAM2Q86T65 1068 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 ARHGAP18Q8N392 663 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 RNF10Q8N5U6 811 aaKnown RBP11.63□□□□□ -0.55
CTSC-201ENST00000227266 EFHBQ8N7U6 833 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 TPCN2Q8NHX9 752 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 CASP10Q92851 521 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 TRMT2BQ96GJ1 504 aaKnown RBP11.63□□□□□ -0.55
CTSC-201ENST00000227266 CFAP57Q96MR6 1250 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 APOL5Q9BWW9 433 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 ASAH2Q9NR71 780 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 HCFC1R1Q9NWW0 138 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 OSER1Q9NX31 292 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTSC-201ENST00000227266 TRPM5Q9NZQ8 1165 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 OGFRQ9NZT2 677 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 UXTQ9UBK9 157 aaPredicted RBP11.63□□□□□ -0.55
CTSC-201ENST00000227266 NUDT5Q9UKK9 219 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 CAPN6Q9Y6Q1 641 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 PTPRDP23468 1912 aa11.63□□□□□ -0.55
CTSC-201ENST00000227266 PRRC2BQ5JSZ5 2229 aaKnown RBP11.63□□□□□ -0.55
CTSC-201ENST00000227266 C2CD4BA6NLJ0 364 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 PALMO75781 387 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 GLP2RO95838 553 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 FYNP06241 537 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 SRGAP2BP0DMP2 458 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 MYL4P12829 197 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 GPD1P21695 349 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 SDC4P31431 198 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 MATKP42679 507 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 ATP11AP98196 1134 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 KCNC3Q14003 757 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 SYPL2Q5VXT5 272 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 PDZD8Q8NEN9 1154 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 ZNF707Q96C28 371 aaPredicted RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 SLC2A13Q96QE2 648 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 TRIM62Q9BVG3 475 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 PRKD2Q9BZL6 878 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 PIDD1Q9HB75 910 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 ABCC13Q9NSE7 274 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 DZANK1Q9NVP4 752 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 IP6K2Q9UHH9 426 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 USTQ9Y2C2 406 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 HYOU1Q9Y4L1 999 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 SYNJ2BP-COX16A0A087WUM0 186 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 GRID2IPA4D2P6 1211 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 ZNF840PA6NDX5 716 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 RARGP13631 454 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 TFE3P19532 575 aaPredicted RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 GABRR2P28476 465 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 CASQ1P31415 396 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 PSEN1P49768 467 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 ZNF143P52747 638 aaPredicted RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 HADHBP55084 474 aaKnown RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 ZNF252P-AS1Q0IIN9 211 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 CDO1Q16878 200 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 C15orf59Q2T9L4 293 aaPredicted RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 CCDC14Q49A88 953 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 HABP4Q5JVS0 413 aaKnown RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 RARS2Q5T160 578 aaKnown RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 ARCQ7LC44 396 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 ADAM32Q8TC27 787 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 RNF139Q8WU17 664 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 OVCA2Q8WZ82 227 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 SMG7Q92540 1137 aaKnown RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 ALS2CR12Q96Q35 445 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 CNPY3Q9BT09 278 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 DDX23Q9BUQ8 820 aaKnown RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 SFXN1Q9H9B4 322 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 COX16Q9P0S2 106 aa11.62□□□□□ -0.55
CTSC-201ENST00000227266 DNMT3BQ9UBC3 853 aaKnown RBP11.62□□□□□ -0.55
CTSC-201ENST00000227266 REV3LO60673 3130 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 PLXNA3P51805 1871 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 FANCGO15287 622 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 PROSCO94903 275 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 TBX18O95935 607 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 FTCDO95954 541 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 RHOP08100 348 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 ZDHHC11BP0C7U3 371 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 RALAP11233 206 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 PTPN2P17706 415 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 NOS2P35228 1153 aa11.61□□□□□ -0.55
CTSC-201ENST00000227266 SSR1P43307 286 aaKnown RBP11.61□□□□□ -0.55
CTSC-201ENST00000227266 SULT1E1P49888 294 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms