RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ROPN1BQ9BZX4 212 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 PIF1Q9H611 641 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 ROPN1Q9HAT0 212 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 SPG21Q9NZD8 308 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 PPIEQ9UNP9 301 aaKnown RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 IQGAP3Q86VI3 1631 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 TPST1O60507 370 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 F9P00740 461 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 KCNA3P22001 575 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 NFYCQ13952 458 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 PTGISQ16647 500 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 SKA1Q96BD8 255 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 ZCCHC17Q9NP64 241 aaKnown RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 AP4E1Q9UPM8 1137 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 DSG3P32926 999 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 FXR1P51114 621 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 GRIK4Q16099 956 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 LRRC8DQ7L1W4 858 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 EXD1Q8NHP7 514 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 CCDC126Q96EE4 140 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 OSBPL6Q9BZF3 934 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 SDR42E2A6NKP2 422 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 EIF2S1P05198 315 aaKnown RBP13.64□□□□□ -0.23
COL1A1-201ENST00000225964 KBTBD12Q3ZCT8 623 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 ZFYVE1Q9HBF4 777 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 KANSL3Q9P2N6 904 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 PCDHB5Q9Y5E4 795 aa13.64□□□□□ -0.23
COL1A1-201ENST00000225964 NKRFO15226 690 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 AKAP5P24588 427 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 LAMTOR4Q0VGL1 99 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TFDP3Q5H9I0 405 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 FAM171A1Q5VUB5 890 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 ZCCHC8Q6NZY4 707 aaKnown RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 STRA8Q7Z7C7 330 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 MICU2Q8IYU8 434 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 FBXO36Q8NEA4 188 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 PPP1R10Q96QC0 940 aaKnown RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 SPATA31A5Q5VU36 1347 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 SPATA31A7Q8IWB4 1347 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 MED24O75448 989 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 CSDE1O75534 798 aaKnown RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 CYP2A7P20853 494 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 GRK4P32298 578 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 NUP62P37198 522 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 COPAP53621 1224 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 KRT77Q7Z794 578 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 KIF2BQ8N4N8 673 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TMEM176AQ96HP8 235 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 GPRC5DQ9NZD1 345 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 PDZK1P1A8MUH7 402 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 RGS5O15539 181 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 NDUFS2O75306 463 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 UBTFL6P0CB48 400 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 RANBP1P43487 201 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TMEM154Q6P9G4 183 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TFAP2DQ7Z6R9 452 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 CBWD2Q8IUF1 395 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 USP7Q93009 1102 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 ARMC7Q9H6L4 198 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 AGO4Q9HCK5 861 aaKnown RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 DRG1Q9Y295 367 aaKnown RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 RNF17Q9BXT8 1623 aaKnown RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 CSF1RP07333 972 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 PON1P27169 355 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 FNTAP49354 379 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 PTPAQ15257 358 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 EDEM1Q92611 657 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TBC1D13Q9NVG8 400 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 PPP1R37O75864 691 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 ZNF23P17027 643 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 NPTX2P47972 431 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 OVGP1Q12889 678 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 MFSD10Q14728 455 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TTC33Q6PID6 262 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TRAF7Q6Q0C0 670 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 PRR23CQ6ZRP0 262 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 FAM131BQ86XD5 332 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 RGL4Q8IZJ4 473 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 TPCN2Q8NHX9 752 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 ERP44Q9BS26 406 aa13.63□□□□□ -0.23
COL1A1-201ENST00000225964 FRMD8P1Q9BZ68 369 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-201ENST00000225964 KATNA1O75449 491 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 PTPN3P26045 913 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 CSHL1Q14406 222 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 POMGNT2Q8NAT1 580 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 UNKQ9C0B0 810 aaKnown RBP13.62□□□□□ -0.23
COL1A1-201ENST00000225964 LRRC40Q9H9A6 602 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 STMN3Q9NZ72 180 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 CTNNAL1Q9UBT7 734 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 KIAA1257Q9ULG3 409 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
COL1A1-201ENST00000225964 NAA30Q147X3 362 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-201ENST00000225964 NBPF12Q5TAG4 269 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms