RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 OAZ2O95190 189 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 SYF2O95926 243 aaKnown RBP15.52■□□□□ 0.08
CCDC47-201ENST00000225726 BDNFP23560 247 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 KLRC2P26717 231 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 FAM193AP78312 1265 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 CAV1Q03135 178 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 DHX9Q08211 1270 aaKnown RBP15.52■□□□□ 0.08
CCDC47-201ENST00000225726 MMRN1Q13201 1228 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 TRIM60Q495X7 471 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 ZC3H12AQ5D1E8 599 aaKnown RBP15.52■□□□□ 0.08
CCDC47-201ENST00000225726 C4orf50Q6ZRC1 276 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 BNIPLQ7Z465 357 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 NPAS4Q8IUM7 802 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 SCML4Q8N228 414 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 BBOF1Q8ND07 529 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 ACTL9Q8TC94 416 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 ZIM3Q96PE6 472 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 SYN3O14994 580 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 HSD17B3P37058 310 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 RABGGTBP53611 331 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 TRIP13Q15645 432 aaPredicted RBP15.52■□□□□ 0.07
CCDC47-201ENST00000225726 DCAF6Q58WW2 860 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 CRIPAKQ8N1N5 446 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 IRGQQ8WZA9 623 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 RNF157Q96PX1 679 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 NPY6RQ99463 290 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 ZNF670Q9BS34 389 aa15.52■□□□□ 0.07
CCDC47-201ENST00000225726 MRPL9Q9BYD2 267 aaKnown RBP15.52■□□□□ 0.07
CCDC47-201ENST00000225726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-201ENST00000225726 NRP1O14786 923 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 ZBED1O96006 694 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 CCL23P55773 120 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 TLE2Q04725 743 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 SPATA2LQ8IUW3 424 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-201ENST00000225726 ZNF333Q96JL9 665 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 ZCWPW1Q9H0M4 648 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 OPA1O60313 960 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 ADCY8P40145 1251 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 GATMP50440 423 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 UAP1Q16222 522 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-201ENST00000225726 DPYSL2Q16555 572 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 CA9Q16790 459 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 OTUD1Q5VV17 481 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-201ENST00000225726 LRIG3Q6UXM1 1119 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 FAF2Q96CS3 445 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 SH3GL2Q99962 352 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 COLEC11Q9BWP8 271 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 PPP1R12CQ9BZL4 782 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 ADAM28Q9UKQ2 775 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 TTC3P53804 2025 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 CAPN2P17655 700 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 ATXN1P54253 815 aaKnown RBP15.51■□□□□ 0.07
CCDC47-201ENST00000225726 ANKRD20A8PQ5CZ79 823 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 HFE2Q6ZVN8 426 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 PSTKQ8IV42 348 aaKnown RBP15.51■□□□□ 0.07
CCDC47-201ENST00000225726 DCP1BQ8IZD4 617 aaKnown RBP15.51■□□□□ 0.07
CCDC47-201ENST00000225726 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-201ENST00000225726 AP4E1Q9UPM8 1137 aa15.51■□□□□ 0.07
CCDC47-201ENST00000225726 USP17L7P0C7H9 530 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 IL4RP24394 825 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 RDXP35241 583 aaKnown RBP15.5■□□□□ 0.07
CCDC47-201ENST00000225726 TMEM175Q9BSA9 504 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 CALCOCO1Q9P1Z2 691 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 COL4A4P53420 1690 aaPredicted RBP15.5■□□□□ 0.07
CCDC47-201ENST00000225726 YJEFN3A6XGL0 299 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 E7ENQ6 273 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 LTFP02788 710 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 TGM2P21980 687 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 L1CAMP32004 1257 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 CYP2C18P33260 490 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 PM20D1Q6GTS8 502 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 RHBDF2Q6PJF5 856 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 UBLCP1Q8WVY7 318 aaPredicted RBP15.5■□□□□ 0.07
CCDC47-201ENST00000225726 RRN3Q9NYV6 651 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 SAE1Q9UBE0 346 aaPredicted RBP15.5■□□□□ 0.07
CCDC47-201ENST00000225726 FZD10Q9ULW2 581 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 PLAAQ9Y263 795 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 TET1Q8NFU7 2136 aa15.5■□□□□ 0.07
CCDC47-201ENST00000225726 ITGA8P53708 1063 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 NOMO1Q15155 1222 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 BHLHA9Q7RTU4 235 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 CCDC185Q8N715 623 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 PCDH9Q9HC56 1237 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 ANAPC5Q9UJX4 755 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 ATP8A1Q9Y2Q0 1164 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 APOL1O14791 398 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 CAPN9O14815 690 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 MCF2LO15068 1137 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 TP73O15350 636 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 ALDH2P05091 517 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 FYNP06241 537 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 PECAM1P16284 738 aaPredicted RBP15.49■□□□□ 0.07
CCDC47-201ENST00000225726 GYS2P54840 703 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 EIF3EP60228 445 aaKnown RBP15.49■□□□□ 0.07
CCDC47-201ENST00000225726 SLMAPQ14BN4 828 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 SLC39A12Q504Y0 691 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 SYPL2Q5VXT5 272 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 SLC9A4Q6AI14 798 aa15.49■□□□□ 0.07
CCDC47-201ENST00000225726 CTU1Q7Z7A3 348 aaKnown RBP15.49■□□□□ 0.07
CCDC47-201ENST00000225726 KCTD15Q96SI1 283 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms