RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SSTR1P30872 391 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 PKDCCQ504Y2 493 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 BOLA3Q53S33 107 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 PPP1R26Q5T8A7 1209 aaPredicted RBP23.1■■□□□ 1.29
CCDC9-201ENST00000221922 C17orf99Q6UX52 265 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 OTOAQ7RTW8 1153 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 SESTD1Q86VW0 696 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 UNC93AQ86WB7 457 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 C12orf29Q8N999 325 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.1■■□□□ 1.29
CCDC9-201ENST00000221922 TEKT4Q8WW24 435 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 DNAJB3Q8WWF6 145 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 MRRFQ96E11 262 aaKnown RBP23.1■■□□□ 1.29
CCDC9-201ENST00000221922 SLC4A5Q9BY07 1137 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 TUBGCP4Q9UGJ1 667 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 IGHA2P01877 340 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 RGS2P41220 211 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 DPYSL3Q14195 570 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 KRT81Q14533 505 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 SNX17Q15036 470 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 CCL14Q16627 93 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 TRNP1Q6NT89 227 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 C3orf62Q6ZUJ4 267 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 CYP4V2Q6ZWL3 525 aaPredicted RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 ZDHHC17Q8IUH5 632 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 ZNF276Q8N554 614 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 FAM71DQ8N9W8 422 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 ZNF398Q8TD17 642 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 TBCBQ99426 244 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 PAFAH2Q99487 392 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 MRPL45Q9BRJ2 306 aaKnown RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 TRIM6Q9C030 488 aaPredicted RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 AP5M1Q9H0R1 490 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 RECQL4O94761 1208 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 RPSAP08865 295 aaKnown RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 T-ENOLP0DO92 83 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 ZNF157P51786 506 aaPredicted RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 CCNG1P51959 295 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 SLC8A3P57103 927 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 SLC6A3Q01959 620 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 EFTUD2Q15029 972 aaKnown RBP eCLIP23.09■■□□□ 1.291e-7■■■■■ 32.7
CCDC9-201ENST00000221922 C15orf59Q2T9L4 293 aaPredicted RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 OLFML1Q6UWY5 402 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 TMEM110Q86TL2 294 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 ACOT1Q86TX2 421 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 PDIK1LQ8N165 341 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 MAB21L3Q8N8X9 362 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 STK32AQ8WU08 396 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 TSPAN18Q96SJ8 248 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 KATNAL1Q9BW62 490 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 NXF3Q9H4D5 531 aaKnown RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 C10orf88Q9H8K7 445 aa23.09■■□□□ 1.29
CCDC9-201ENST00000221922 UBQLN1Q9UMX0 589 aaKnown RBP23.09■■□□□ 1.29
CCDC9-201ENST00000221922 PIK3R2O00459 728 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 PPEF2O14830 753 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 TM9SF1O15321 606 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 RGS7P49802 495 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 SLC45A4Q5BKX6 768 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 SH3PXD2AQ5TCZ1 1133 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 DARS2Q6PI48 645 aaKnown RBP23.08■■□□□ 1.29
CCDC9-201ENST00000221922 PPP1R13LQ8WUF5 828 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 DCAKDQ8WVC6 231 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 ALKBH8Q96BT7 664 aaKnown RBP23.08■■□□□ 1.29
CCDC9-201ENST00000221922 RNF157Q96PX1 679 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 APBA2Q99767 749 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 HES2Q9Y543 173 aa23.08■■□□□ 1.29
CCDC9-201ENST00000221922 C2CD2LO14523 706 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 TRAFD1O14545 582 aaPredicted RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 ECM2O94769 699 aaPredicted RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 MYL3P08590 195 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 TARSP26639 723 aaKnown RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 SDC4P31431 198 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 RNASELQ05823 741 aaKnown RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 MMRN1Q13201 1228 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 CDO1Q16878 200 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 CCDC14Q49A88 953 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 C9orf57Q5W0N0 161 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 ARHGAP17Q68EM7 881 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 PMF1Q6P1K2 205 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 TTC30AQ86WT1 665 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 BANPQ8N9N5 519 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 FBXO36Q8NEA4 188 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 SOCS4Q8WXH5 440 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 SLC7A6OSQ96CW6 309 aaPredicted RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 PIWIL1Q96J94 861 aaKnown RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 ADAM33Q9BZ11 813 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 XPO7Q9UIA9 1087 aaKnown RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 HAO1Q9UJM8 370 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 TREHO43280 583 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 TMEM63AO94886 807 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 ATP2A2P16615 1042 aaKnown RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 TGM2P21980 687 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 ADRA1DP25100 572 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 HOXC8P31273 242 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 SLC35F5Q8WV83 523 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 TMEM40Q8WWA1 233 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 C18orf25Q96B23 403 aaPredicted RBP23.07■■□□□ 1.28
CCDC9-201ENST00000221922 DNAI2Q9GZS0 605 aa23.07■■□□□ 1.28
CCDC9-201ENST00000221922 VPS11Q9H270 941 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms