RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 JADE1Q6IE81 842 aa11.6□□□□□ -0.55
NEFM-201ENST00000221166 TRMT10BQ6PF06 316 aaKnown RBP11.6□□□□□ -0.55
NEFM-201ENST00000221166 IZUMO2Q6UXV1 221 aa11.6□□□□□ -0.55
NEFM-201ENST00000221166 SESTD1Q86VW0 696 aa11.6□□□□□ -0.55
NEFM-201ENST00000221166 RBM15BQ8NDT2 890 aaKnown RBP11.6□□□□□ -0.55
NEFM-201ENST00000221166 MMP19Q99542 508 aa11.6□□□□□ -0.55
NEFM-201ENST00000221166 GREB1LQ9C091 1923 aaPredicted RBP11.6□□□□□ -0.55
NEFM-201ENST00000221166 ZNF831Q5JPB2 1677 aa11.6□□□□□ -0.55
NEFM-201ENST00000221166 SLX4Q8IY92 1834 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 PRR5-ARHGAP8B1AHC4 643 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 MSCO60682 206 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 STAG3L1P0CL83 205 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 AP2B1P63010 937 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 YWHAZP63104 245 aaKnown RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 ARHGAP8P85298 464 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 SLC25A3Q00325 362 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 PRKD1Q15139 912 aaPredicted RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 AMHR2Q16671 573 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 OR6B3Q8NGW1 331 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 FRMD8P1Q9BZ68 369 aaPredicted RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 C2orf40Q9H1Z8 148 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 DNAJC16Q9Y2G8 782 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 LRCH1Q9Y2L9 728 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 TAF1LQ8IZX4 1826 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 PSEN1P49768 467 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 GOLGA7BQ2TAP0 167 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 CES3Q6UWW8 571 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 DENND5BQ6ZUT9 1274 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 FAM183BPQ6ZVS7 135 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 ACOT1Q86TX2 421 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 TMPRSS6Q8IU80 811 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 FBXO27Q8NI29 283 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 ZNF333Q96JL9 665 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 ANKRD27Q96NW4 1050 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 RNF157Q96PX1 679 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 PEBP4Q96S96 227 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 CPSF2Q9P2I0 782 aaKnown RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 LNPEPQ9UIQ6 1025 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 CPSF3Q9UKF6 684 aaKnown RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 TSPAN16Q9UKR8 245 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 PCDHGC3Q9UN70 934 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 CNTN6Q9UQ52 1028 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 SIPA1L1O43166 1804 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 CCDC160A6NGH7 325 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 C3orf70A6NLC5 250 aaPredicted RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 SMAPO00193 183 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 MAFO75444 373 aaPredicted RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 SPAG6O75602 509 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 DLDP09622 509 aaKnown RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 LCP1P13796 627 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 TTLL12Q14166 644 aaPredicted RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 NOMO1Q15155 1222 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 RIPOR1Q6ZS17 1223 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 COPS5Q92905 334 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 PIWIL1Q96J94 861 aaKnown RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 TEPSINQ96N21 525 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 SDCBP2Q9H190 292 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 SSU72Q9NP77 194 aaKnown RBP11.59□□□□□ -0.55
NEFM-201ENST00000221166 ETNK2Q9NVF9 386 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 SLC17A6Q9P2U8 582 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 SNX9Q9Y5X1 595 aa11.59□□□□□ -0.55
NEFM-201ENST00000221166 PDE5AO76074 875 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 PIGRP01833 764 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 APOEP02649 317 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 HOXC6P09630 235 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 ACADSP16219 412 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 ADORA2BP29275 332 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 PPP1R15BQ5SWA1 713 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 HEATR6Q6AI08 1181 aaKnown RBP11.58□□□□□ -0.55
NEFM-201ENST00000221166 ISLR2Q6UXK2 745 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 TREML1Q86YW5 311 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 UNC5BQ8IZJ1 945 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 NIPA2Q8N8Q9 360 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 SLC4A11Q8NBS3 891 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 FAM167AQ96KS9 214 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 FGD4Q96M96 766 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 PHACTR1Q9C0D0 580 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 PAPOLBQ9NRJ5 636 aaKnown RBP11.58□□□□□ -0.55
NEFM-201ENST00000221166 TAGLN3Q9UI15 199 aa11.58□□□□□ -0.55
NEFM-201ENST00000221166 PDGFRBP09619 1106 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 GRIA1P42261 906 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 HIC1Q14526 733 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 HSDL1Q3SXM5 330 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 FASTKD1Q53R41 847 aaKnown RBP11.58□□□□□ -0.56
NEFM-201ENST00000221166 SULF1Q8IWU6 871 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 PLD5Q8N7P1 536 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 C1orf127Q8N9H9 656 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 NLRP7Q8WX94 980 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 PYDC1Q8WXC3 89 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 USP6NLQ92738 828 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 CDKL2Q92772 493 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 AGAP3Q96P47 875 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 EBF4Q9BQW3 602 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 CDT1Q9H211 546 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 CYLDQ9NQC7 956 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 IL1RAPL1Q9NZN1 696 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 PLLPQ9Y342 182 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 C2CD2Q9Y426 696 aa11.58□□□□□ -0.56
NEFM-201ENST00000221166 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms