RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SH3GL2Q99962 352 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 RNPEPL1Q9HAU8 725 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 TCF7L2Q9NQB0 619 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 A0A087X0T9 212 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 FAM25AB3EWG3 89 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 FAM25CB3EWG5 89 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 FAM25GB3EWG6 89 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 XPO1O14980 1071 aaKnown RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 SLC22A2O15244 555 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 FAM228BP0C875 321 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 SLC9A1P19634 815 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 GNL1P36915 607 aaPredicted RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 LHX1P48742 406 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 GRB10Q13322 594 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 GIT2Q14161 759 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 FRG1Q14331 258 aaKnown RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 ZNF268Q14587 947 aaPredicted RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 NTRK3Q16288 839 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 PPP4R4Q6NUP7 873 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 TRAF7Q6Q0C0 670 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 PLEKHM3Q6ZWE6 761 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 TAS2R42Q7RTR8 314 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 POLNQ7Z5Q5 900 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 FAM71DQ8N9W8 422 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 SEPT1Q8WYJ6 367 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 THAP2Q9H0W7 228 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 DYRK4Q9NR20 520 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 NDFIP2Q9NV92 336 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 FETUBQ9UGM5 382 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 TRMT6Q9UJA5 497 aaKnown RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 TMX2Q9Y320 296 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 DAGLAQ9Y4D2 1042 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 ZNF142P52746 1687 aaPredicted RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 NBPF26B4DH59 902 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 OGTO15294 1046 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 SNAPC5O75971 98 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 TALDO1P37837 337 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 DCTN2Q13561 401 aaKnown RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 INAQ16352 499 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 NFIL3Q16649 462 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 DGUOKQ16854 277 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 PDPK2PQ6A1A2 396 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 ARID3BQ8IVW6 561 aaPredicted RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 EID3Q8N140 333 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 NBPF15Q8N660 670 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 EPS8L3Q8TE67 593 aaKnown RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 FAM151AQ8WW52 585 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 GPAMQ9HCL2 828 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 SSU72Q9NP77 194 aaKnown RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 KCNH7Q9NS40 1196 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 IRAK4Q9NWZ3 460 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 CIDEBQ9UHD4 219 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 DNAJA2O60884 412 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SHOX2O60902 331 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 CAMTA2O94983 1202 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 BCL10O95999 233 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 PDGFRBP09619 1106 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 LCP1P13796 627 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 AKR1B1P15121 316 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 AXLP30530 894 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 AIF1P55008 147 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 PLD1Q13393 1074 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 INSCQ1MX18 579 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 GOLGA7BQ2TAP0 167 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 ERMARDQ5T6L9 678 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CCSAPQ6IQ19 270 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 MFSD5Q6N075 450 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SLFN11Q7Z7L1 901 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CREG2Q8IUH2 290 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CCDC103Q8IW40 242 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CENPLQ8N0S6 344 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 ZDHHC15Q96MV8 337 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CACNA2D2Q9NY47 1150 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 PRR12Q9ULL5 1215 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SPDYE5A6NIY4 337 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 RBAK-RBAKDNI3L0D1 243 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 MED26O95402 600 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 NDUFB10O96000 172 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CYP3A4P08684 503 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 ADORA2BP29275 332 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 HARS2P49590 506 aaKnown RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 TOB1P50616 345 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 RPL26P61254 145 aaKnown RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 DAB2P98082 770 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 TBL3Q12788 808 aaKnown RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 DDR2Q16832 855 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SPDYE7PQ495Y7 208 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 OLFML2BQ68BL8 750 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 AAGABQ6PD74 315 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 LRRC49Q8IUZ0 686 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SLC9A9Q8IVB4 645 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 STK40Q8N2I9 435 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 FBXO36Q8NEA4 188 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 FAM111AQ96PZ2 611 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CAMKK2Q96RR4 588 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SLC25A23Q9BV35 468 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 DCLK3Q9C098 648 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 MTMR12Q9C0I1 747 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 NMRAL1Q9HBL8 299 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms