RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 BTKQ06187 659 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 FBXO47Q5MNV8 452 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
SF3A1-201ENST00000215793 IYDQ6PHW0 289 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 ZNF786Q8N393 782 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 FBXL16Q8N461 479 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 SYTL5Q8TDW5 730 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-201ENST00000215793 JADE3Q92613 823 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 AGXT2Q9BYV1 514 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 CXorf56Q9H5V9 222 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 GPAMQ9HCL2 828 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 GPATCH2LQ9NWQ4 482 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 CTNNAL1Q9UBT7 734 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 ITGA11Q9UKX5 1188 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 PIK3CDO00329 1044 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 AVPR1AP37288 418 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 ELAVL2Q12926 359 aaKnown RBP13.97□□□□□ -0.17
SF3A1-201ENST00000215793 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 ZNF284Q2VY69 593 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 KAZALD1Q96I82 304 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 ADGRE3Q9BY15 652 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 SYNDIG1Q9H7V2 258 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 TAGLN3Q9UI15 199 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 PNMA8BQ9ULN7 279 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-201ENST00000215793 C2CD2LO14523 706 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 TCF3P15923 654 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 CYP51A1Q16850 503 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 ZCWPW2Q504Y3 356 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 SLC22A9Q8IVM8 553 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 TRIM48Q8IWZ4 208 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 POP1Q99575 1024 aaKnown RBP13.97□□□□□ -0.17
SF3A1-201ENST00000215793 TBC1D13Q9NVG8 400 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 TMCC3Q9ULS5 477 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 GLP2RO95838 553 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 MBL2P11226 248 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-201ENST00000215793 CTXN3Q4LDR2 81 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 ERAP2Q6P179 960 aa13.97□□□□□ -0.17
SF3A1-201ENST00000215793 LMTK2Q8IWU2 1503 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 NKRFO15226 690 aaKnown RBP eCLIP13.96□□□□□ -0.17
SF3A1-201ENST00000215793 MAP3K13O43283 966 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 LZTS3O60299 673 aaPredicted RBP13.96□□□□□ -0.17
SF3A1-201ENST00000215793 FKBP6O75344 327 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 SCTRP47872 440 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 GLRBP48167 497 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 PRKCQQ04759 706 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 CAMK2GQ13555 558 aaPredicted RBP13.96□□□□□ -0.17
SF3A1-201ENST00000215793 NFYCQ13952 458 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 CCDC142Q17RM4 750 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 ATP6AP1LQ52LC2 224 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 CCDC81Q6ZN84 652 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 CNBD2Q96M20 576 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 ZCWPW1Q9H0M4 648 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 PAIP2BQ9ULR5 123 aaKnown RBP13.96□□□□□ -0.17
SF3A1-201ENST00000215793 RASSF9O75901 435 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 IFNA14P01570 189 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 TPBGLP0DKB5 382 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 PSMC3P17980 439 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 RRM2P31350 389 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 GCNT1Q02742 428 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 MTA1Q13330 715 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 KHDRBS2Q5VWX1 349 aaKnown RBP13.96□□□□□ -0.17
SF3A1-201ENST00000215793 ZNF280DQ6N043 979 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 ZDHHC17Q8IUH5 632 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 PCSK9Q8NBP7 692 aaKnown RBP13.96□□□□□ -0.17
SF3A1-201ENST00000215793 WDR41Q9HAD4 459 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 USE1Q9NZ43 259 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 SNX13Q9Y5W8 968 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 RNF103O00237 685 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 SLC15A2Q16348 729 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 FUT11Q495W5 492 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 OTOAQ7RTW8 1153 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 EMC1Q8N766 993 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 RIN3Q8TB24 985 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 C10orf88Q9H8K7 445 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 FAM205AQ6ZU69 1335 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 PTPRMP28827 1452 aa13.96□□□□□ -0.17
SF3A1-201ENST00000215793 CES2O00748 559 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 KPNA6O60684 536 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 SERPINI2O75830 405 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 RHOCP08134 193 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 FCGR1AP12314 374 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 GPC1P35052 558 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 CDC16Q13042 620 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 BFSP2Q13515 415 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 ZNF268Q14587 947 aaPredicted RBP13.96□□□□□ -0.18
SF3A1-201ENST00000215793 RASA2Q15283 850 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 MCOLN2Q8IZK6 566 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 FICDQ9BVA6 458 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 BBS2Q9BXC9 721 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 SLC25A13Q9UJS0 675 aa13.96□□□□□ -0.18
SF3A1-201ENST00000215793 BARX2Q9UMQ3 279 aaPredicted RBP13.96□□□□□ -0.18
SF3A1-201ENST00000215793 SLC12A8A0AV02 714 aa13.95□□□□□ -0.18
SF3A1-201ENST00000215793 RHOAP61586 193 aa13.95□□□□□ -0.18
SF3A1-201ENST00000215793 PKN1Q16512 942 aa13.95□□□□□ -0.18
SF3A1-201ENST00000215793 GALNTL6Q49A17 601 aa13.95□□□□□ -0.18
SF3A1-201ENST00000215793 C11orf96Q7Z7L8 435 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms