RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 MYLK2Q9H1R3 596 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 RRN3Q9NYV6 651 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 BTNL10A8MVZ5 291 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 C19orf81C9J6K1 198 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 RBAK-RBAKDNI3L0D1 243 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 ABLIM1O14639 778 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 HUS1O60921 280 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 MAGEA8P43361 318 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 NCALDP61601 193 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 ITGADQ13349 1161 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 ARL13BQ3SXY8 428 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 HYIQ5T013 277 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 PID1Q7Z2X4 250 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 ANKRD13AQ8IZ07 590 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 EXD1Q8NHP7 514 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 HES6Q96HZ4 224 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 GLIS2Q9BZE0 524 aaPredicted RBP12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 RSAD1Q9HA92 442 aa12.56□□□□□ -0.4
TSPAN9-201ENST00000011898 DICER1Q9UPY3 1922 aaKnown RBP12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 AKAP10O43572 662 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 MAPTP10636 758 aaKnown RBP12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 NFKBIAP25963 317 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 MARCKSL1P49006 195 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 GRIK3Q13003 919 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 BEST2Q8NFU1 509 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 TTC8Q8TAM2 541 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 MAGEB18Q96M61 343 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 CHST7Q9NS84 486 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 AGPSO00116 658 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 MGRN1O60291 552 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 CBFA2T3O75081 653 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 UNC5CO95185 931 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 NPTXRO95502 500 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 MORF4L2Q15014 288 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 TFDP3Q5H9I0 405 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 C6orf183Q5T699 404 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 CROCCP3Q8IVE0 287 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 PRELID2Q8N945 189 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 ATXN7L3BQ96GX2 97 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 MTMR12Q9C0I1 747 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 NMRK1Q9NWW6 199 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 ST13P50502 369 aaKnown RBP12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 NAA20P61599 178 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 FLOT2Q14254 428 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 ERMARDQ5T6L9 678 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 RWDD4Q6NW29 188 aaKnown RBP12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 UBA3Q8TBC4 463 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 ALG3Q92685 438 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 SHISA4Q96DD7 197 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 GCNAQ96QF7 691 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 WDR18Q9BV38 432 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 MANSC1Q9H8J5 431 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 ELP3Q9H9T3 547 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
TSPAN9-201ENST00000011898 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 SMIM31A0A1B0GVY4 71 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 FANCGO15287 622 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 MAP3K6O95382 1288 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 PSMG1O95456 288 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 SNHG28P0DPA3 235 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 TRMT5Q32P41 509 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 ATF7IP2Q5U623 682 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 TAS2R42Q7RTR8 314 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 PPP1R36Q96LQ0 422 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 TEPSINQ96N21 525 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 TRIM39Q9HCM9 518 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 DSEQ9UL01 958 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 STAP1Q9ULZ2 295 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 INPP5FQ9Y2H2 1132 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 SNRPAP09012 282 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 GCNT1Q02742 428 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 TAF1CQ15572 869 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 LRRC8EQ6NSJ5 796 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 CCDC117Q8IWD4 279 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 ABRAQ8N0Z2 381 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 ACTL9Q8TC94 416 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 TMA16Q96EY4 203 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 FAM96AQ9H5X1 160 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 TDRKHQ9Y2W6 561 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 LINC00854A0A1B0GVQ3 168 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 KPNA4O00629 521 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 FAM58BPP0C7Q3 252 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 CDH3P22223 829 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 MAPK10P53779 464 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 PLOD1Q02809 727 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 LIN52Q52LA3 116 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 IER5Q5VY09 327 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 ZNF606Q8WXB4 792 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 DCLK3Q9C098 648 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 PAK5Q9P286 719 aa12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 IPO11Q9UI26 975 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 ATXN2Q99700 1313 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-201ENST00000011898 KPNA7A9QM74 516 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 OGTO15294 1046 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 FKBP6O75344 327 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 RBP5P82980 135 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 NME3Q13232 169 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms