RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Fam163bQ8BUM6 167 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Mcoln2Q8K595 566 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Nudcd3Q8R1N4 363 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pcdh18Q8VHR0 1134 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pomgnt1Q91X88 660 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Vwa7Q9JHA8 891 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Fndc3c1Q6DFV6 1356 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 4931406B18RikA2RSL7 367 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Serpinb3aG3X9V8 387 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Spin2fJ3QPU0 254 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Krt13P08730 437 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pgk1P09411 417 aaKnown RBP11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pex2P55098 305 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Rab6bP61294 208 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 YwhaeP62259 255 aaKnown RBP11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 G3bp2P97379 482 aaKnown RBP11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 LbpQ61805 481 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Cyp3a16Q64481 504 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ush1gQ80T11 461 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Rmnd1Q8CI78 450 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Sytl1Q99N80 567 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Atp8b4A2ANX3 1194 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ism2D3Z6A3 493 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ebf3O08791 596 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Nedd9O35177 833 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Tnk2O54967 1055 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 FlgP11088 336 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ass1P16460 412 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gsta4P24472 222 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Sesn2P58043 480 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Scaf4Q6PFF0 1209 aaKnown RBP11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Tas2r102Q7M717 329 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Smndc1Q8BGT7 238 aaKnown RBP11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Fbxw8Q8BIA4 598 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Mical2Q8BML1 960 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Hsdl1Q8BTX9 330 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Dcun1d2Q8BZJ7 259 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Rpp40Q8R1F9 363 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ap3m2Q8R2R9 418 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Sgsm3Q8VCZ6 750 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 PlvapQ91VC4 438 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Dpp3Q99KK7 738 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Nme5Q99MH5 211 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 PompQ9CQT5 141 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Mageb3Q9D2H4 330 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gins2Q9D600 185 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Lima1Q9ERG0 753 aaKnown RBP11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ccr10Q9JL21 362 aa11.71□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gm11549A0A286YD83 63 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Cyp2t4E9PWV0 503 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 PtproE9Q612 1226 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Apba3O88888 571 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Slc10a3P21129 473 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 PrkcdP28867 674 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Lhx5P61375 402 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Slc26a2Q62273 739 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 FAM120AQ6A0A9 1112 aaKnown RBP11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Cand1Q6ZQ38 1230 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 ItpkcQ7TS72 678 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Lrrc27Q80YS5 523 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Dhx32Q8BZS9 744 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ccser1Q8C0C4 895 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Socs4Q91ZA6 436 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Slc12a9Q99MR3 914 aa11.71□□□□□ -0.54
Lig1-211ENSMUST00000177588 Arhgef10lA2AWP8 1280 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Gm10801F7C7Q0 168 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Lamp1P11438 406 aaKnown RBP11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Prim2P33610 505 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Alox15P39654 663 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Yy1Q00899 414 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Tfdp1Q08639 410 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Zbtb48Q1H9T6 681 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Znf746Q3U133 652 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Cyp2c29Q64458 490 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ankrd6Q69ZU8 712 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Znf219Q6IQX8 726 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Znf12Q7TSI0 686 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Dars2Q8BIP0 653 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ccdc159Q8C963 411 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ddx39aQ8VDW0 427 aaKnown RBP11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 CoprsQ9CQ13 173 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Castor1Q9CWQ8 331 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Mrpl4Q9DCU6 294 aaKnown RBP11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 ClcnkbQ9WUB6 687 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Kcnd2Q9Z0V2 630 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Pcdh15Q99PJ1 1943 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ms4a14A0A087WSD2 1232 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Olfr456B2RT27 312 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Gm3371F7CQW8 167 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 ChkaO54804 453 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Cbfa2t2O70374 594 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 AlbP07724 608 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Atoh1P48985 351 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 MafbP54841 323 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Grm1P97772 1199 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Cdk7Q03147 346 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Lrch2Q3UMG5 773 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Arl13bQ640N2 427 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Gabbr2Q80T41 940 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ip6k2Q80V72 448 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms