RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Zbtb46Q8BID6 600 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cdh7Q8BM92 785 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Itpk1Q8BYN3 419 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Sh3rf2Q8BZT2 735 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Slc8a2Q8K596 921 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Olfr478Q8VG04 314 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ppa2Q91VM9 330 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Txndc5Q91W90 417 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Papd4Q91YI6 484 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rgs18Q99PG4 235 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Med4Q9CQA5 270 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ola1Q9CZ30 396 aaKnown RBP12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gm3404Q9D506 307 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Eef1akmt2Q9D853 244 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Sgf29Q9DA08 293 aaKnown RBP12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ndrg2Q9QYG0 371 aaKnown RBP12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rnf103Q9R1W3 683 aa12.83□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Tex13aA2AFS9 377 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Wdr78E9PYY5 807 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Mybpc3O70468 1270 aaKnown RBP12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Pde8aO88502 823 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Fgd3O88842 733 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rab23P35288 237 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cnr2P47936 347 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 PkmP52480 531 aaKnown RBP12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Sh3bp1P55194 680 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Timm13P62075 95 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 PrlrQ08501 608 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 SlmapQ3URD3 845 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Sval3Q76I99 144 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Zscan22Q8BGS5 496 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Tmco3Q8BH01 678 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Clec4a3Q8JZX6 237 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Arhgap18Q8K0Q5 663 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 AagabQ8R2R3 316 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Scrn2Q8VCA8 425 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Olfr356Q8VFP5 315 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Masp2Q91WP0 685 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Get4Q9D1H7 327 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 GOLGA7BQ9D428 167 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cacng3Q9JJV5 315 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Pdk2Q9JK42 407 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Mtm1Q9Z2C5 603 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Kat6aQ8BZ21 2003 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Spag17Q5S003 2320 aa12.82□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cacna1bO55017 2327 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gm38655A0A286YDK6 273 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Fam171a1A2ATK9 892 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rfx8D3YU81 596 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Trim30cD3YVI9 513 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gm2897K7N6T7 172 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Acot1O55137 419 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cd8aP01731 247 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 TktP40142 623 aaKnown RBP12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cetn1P41209 172 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Tead2P48301 445 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 YwhagP61982 247 aaKnown RBP12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Htr4P97288 388 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ppp4r3cQ3V0Y1 813 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 EndouQ3V188 412 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Traf3Q60803 567 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Sim2Q61079 657 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Sema4cQ64151 834 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Cspg5Q71M36 566 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 RragaQ80X95 313 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Kat5Q8CHK4 513 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Znf426Q8R1D1 550 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Impa2Q91UZ5 290 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Dnajc14Q921R4 703 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rilpl2Q99LE1 197 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 AticQ9CWJ9 592 aaKnown RBP12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Ndufv2Q9D6J6 248 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Scnn1gQ9WU39 655 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Apobec2Q9WV35 224 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Nfs1Q9Z1J3 459 aa12.81□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Igkv10-95A0A0G2JFY3 115 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Fam81bA0A140LI28 432 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 4933424G06RikA0A140LIP3 267 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Nhsl2B1AXH1 854 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gm28042B7ZCM9 1014 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Mctp1E9PV86 951 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gm5624F6ZZG8 207 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Vmn1r176G3UW31 304 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Zbtb11G5E8B9 1050 aaKnown RBP12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gm3542K7N6U2 270 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rrm1P07742 792 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Hsp90aa1P07901 733 aaKnown RBP12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Gmeb2P58929 530 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Myo1fP70248 1099 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Smyd1P97443 490 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Nxpe4Q52KP5 543 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Mapk6Q61532 720 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Rxfp1Q6R6I7 758 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Zfp397Q7TNK4 527 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Efcab14Q8BGQ6 484 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Anks1bQ8BIZ1 1259 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 DrgxQ8BYH0 263 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Dnm3Q8BZ98 863 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Uba3Q8C878 462 aa12.8□□□□□ -0.36
Ccdc28b-202ENSMUST00000106035 Zc2hc1cQ8CCG1 527 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms