RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 ClmnQ8C5W0 1052 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Angel1Q8VCU0 667 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Olfr532Q8VGT4 309 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 EpgnQ924X1 152 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 PudpQ9D5U5 234 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 CrnnD3YUU6 520 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Fam83fQ3UKU4 495 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rhox12Q4TU81 186 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Trmt10aQ8C1Z8 328 aaKnown RBP10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Samd7Q8C8Y5 445 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 OgtQ8CGY8 1046 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 MydgfQ9CPT4 166 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Adrm1Q9JKV1 407 aa10.73□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gm5930D3Z257 264 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Itgb3O54890 787 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Smg5Q6ZPY2 1017 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Adcy4Q91WF3 1077 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Lpin2Q99PI5 893 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2abC0HKE1 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2acC0HKE2 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2adC0HKE3 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2aeC0HKE4 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2agC0HKE5 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2aiC0HKE6 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2anC0HKE7 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2aoC0HKE8 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2apC0HKE9 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Cyp2d10P24456 504 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Copz1P61924 177 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist3h2aQ8BFU2 130 aaKnown RBP10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Smarcal1Q8BJL0 910 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2afQ8CGP5 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2ahQ8CGP6 128 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2akQ8CGP7 130 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Stx5Q8K1E0 355 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 H2afjQ8R1M2 129 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Syt12Q920N7 421 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Serpina1fQ9DCQ7 411 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Myo3aQ8K3H5 1613 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gm3095E9Q058 166 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Usp17lbE9Q9U0 468 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Crabp2P22935 138 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Fam228bQ497Q6 232 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Luzp2Q8BGY3 345 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ifi30Q9ESY9 248 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Slco1a1Q9QXZ6 670 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Stmn3O70166 180 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rad54lP70270 747 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gcnt1Q09324 428 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Mcm9Q2KHI9 1134 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Fam35aQ3UEN2 891 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 BC051142Q3V0M8 400 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Nlrp9bQ66X22 1003 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Wdr91Q7TMQ7 748 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Plekhm3Q8BM47 761 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rsl1d1Q8BVY0 452 aaKnown RBP10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 HlfQ8BW74 295 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 RergQ8R367 199 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Pip4k2cQ91XU3 421 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Sf3b3Q921M3 1217 aaKnown RBP10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gcnt4E9Q649 455 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ttc39dQ0VF76 604 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Slc6a15Q8BG16 729 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Wdr48Q8BH57 676 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Klhl2Q8JZP3 593 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Snapc2Q91XA5 359 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tex44Q9DA60 530 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Nfu1Q9QZ23 255 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Slc6a21A0A1B0GSD2 748 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 C130060K24RikG3UWA8 416 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ints2Q80UK8 1198 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Afap1l1Q8BZI0 768 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tmem154Q8C4Q9 181 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Trip10Q8CJ53 603 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 RnmtQ9D0L8 465 aaKnown RBP10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hddc3Q9D114 179 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 HaghlQ9DB32 283 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Myo1cQ9WTI7 1063 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tulp4Q9JIL5 1547 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Kiaa1107Q80TK0 1369 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 JchainP01592 159 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 S100a9P31725 113 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Man1a2P39098 641 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 SnrpaQ62189 287 aaKnown RBP10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Map10Q8BJS7 891 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tesk2Q8VCT9 570 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Olfr697Q8VFM4 317 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gap43P06837 227 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Serac1Q3U213 654 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Magee1Q6PCZ4 918 aaKnown RBP10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 CbsQ91WT9 561 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Slc5a5Q99PN0 618 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Mrpl46Q9EQI8 283 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Chek2Q9Z265 546 aa10.72□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Mdh1P14152 334 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tbc1d13Q8R3D1 400 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Oas1cQ924S2 362 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Cops7aQ9CZ04 275 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Cyb561d2Q9WUE3 222 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Atp6v1b2P62814 511 aa10.71□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms