RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Atp1a2Q6PIE5 1020 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Slitrk1Q810C1 696 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Prl7b1Q8CGZ9 251 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Stau2Q8CJ67 570 aaKnown RBP10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Sytl2Q99N50 950 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Sgf29Q9DA08 293 aaKnown RBP10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Oaz3Q9R109 243 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Noc2lQ9WV70 747 aaKnown RBP10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cfap221A9Q751 836 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Trim30cD3YVI9 513 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 9230113P08RikD3YWX3 137 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Lipo2D3YY49 398 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Serpinb9O08797 374 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Per2O54943 1257 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cdh9P70407 786 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Defb25Q30KN8 71 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cldn11Q60771 207 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Efcab14Q8BGQ6 484 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Nrip1Q8CBD1 1161 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 D8Ertd738eQ8R1F0 94 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Pcdhgb1Q91XX8 918 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 LactbQ9EP89 551 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cetn2Q9R1K9 172 aa10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Tjp2Q9Z0U1 1167 aaKnown RBP10.37□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Arhgap42B2RQE8 841 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 YwhagP61982 247 aaKnown RBP10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gabrb2P63137 512 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Znhit6Q3UFB2 460 aaKnown RBP10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ccdc61Q3UJV1 511 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Rhbdf2Q80WQ6 827 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Best2Q8BGM5 508 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ctage5Q8R311 779 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Pcdhb1Q91Y08 818 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 CenpsQ9D084 142 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 IvdQ9JHI5 424 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Rfc2Q9WUK4 349 aaKnown RBP10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ppp2r3dQ9Z176 491 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Rpl9-ps1S4R1R7 191 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Alpk2Q91ZB0 2144 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Numa1E9Q7G0 2094 aaKnown RBP10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Apold1E9Q0X2 246 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gm6121L7MUF1 212 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Vav1P27870 845 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Hrh2P97292 397 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cfhr2Q4LDF6 332 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 MlipQ5FW52 269 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ttyh3Q6P5F7 524 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Papd7Q6PB75 542 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gpr62Q80UC6 358 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Iars2Q8BIJ6 1012 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Mageb18Q8BQR7 327 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Q8BZE1 841 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ugt3a2Q8JZZ0 523 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Sh3d19Q91X43 789 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 AticQ9CWJ9 592 aaKnown RBP10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 QpctQ9CYK2 362 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Serpina1fQ9DCQ7 411 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Pck1Q9Z2V4 622 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Rtl9Q32KG4 1339 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Lcn6A2AJB9 181 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Skint6A7XUZ6 1240 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ccnyl1D3YUJ3 367 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ap2a2P17427 938 aaKnown RBP10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Slc1a1P51906 523 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Fam171bQ14CH0 825 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Dalrd3Q6PJN8 538 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Tdpoz4Q6YCH2 370 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Usp1Q8BJQ2 784 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 TxlnbQ8VBT1 685 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cox18Q8VC74 331 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Trps1Q925H1 1281 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Arhgef10Q8C033 1345 aa10.36□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gm3642K7N6V4 267 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 HpdP49429 393 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 RalaP63321 206 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Sdr16c6Q05A13 316 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Fubp3Q3TIX6 575 aaKnown RBP10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Casd1Q7TN73 797 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Zdhhc17Q80TN5 632 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Slco2b1Q8BXB6 683 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ppm1kQ8BXN7 372 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Prpf39Q8K2Z2 665 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gps1Q99LD4 471 aaKnown RBP10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Lysmd3Q99LE3 305 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ephx1Q9D379 455 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ccdc91Q9D8L5 442 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ptger1P35375 405 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Sec1P97353 368 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Hdhd2Q3UGR5 259 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 ScapQ6GQT6 1276 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Rasa4Q6PFQ7 802 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 DcakdQ8BHC4 231 aaKnown RBP10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 MylipQ8BM54 445 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Csnk1g1Q8BTH8 459 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 AA792892Q8C6S1 278 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Uba6Q8C7R4 1053 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Pcdha10Q91Y20 946 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Mapk13Q9Z1B7 366 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Fgf15O35622 218 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Dmp1O55188 503 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms