RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Acot5Q6Q2Z6 421 aa12□□□□□ -0.49
Col9a1-202ENSMUST00000088349 TdrkhQ80VL1 560 aa12□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Exoc3l1Q8BI71 739 aa12□□□□□ -0.49
Col9a1-202ENSMUST00000088349 6820408C15RikQ8BJX2 354 aa12□□□□□ -0.49
Col9a1-202ENSMUST00000088349 PdgfcQ8CI19 345 aa12□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Taf11Q99JX1 211 aa12□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Ccdc103Q9D9P2 237 aa12□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Ggps1Q9WTN0 300 aa12□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Pgap3A2A559 320 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Zbed6D2EAC2 980 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Kifc5bE9PUA5 672 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 AlpiF8VPQ6 554 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 ItgalP24063 1163 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Kcna2P63141 499 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 PrkcbP68404 671 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Lrrc14bQ3UJB3 510 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Psg28Q4KL66 472 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Znf185Q62394 352 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Dusp16Q6PCP3 660 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Ahcyl1Q80SW1 530 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Thnsl1Q8BH55 747 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Lyve1Q8BHC0 318 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Q8BHN7 327 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 DnerQ8JZM4 737 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Necab2Q91ZP9 389 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Zfp64Q99KE8 643 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Slc12a9Q99MR3 914 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Psmd9Q9CR00 222 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Mms19Q9D071 1031 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 NinQ61043 2035 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Ccdc175E9PVB3 822 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Kcng2F7A6P6 480 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Icam1P13597 537 aaKnown RBP11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Ass1P16460 412 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Neurog2P70447 263 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Atxn7l3bQ3UD01 97 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Rcsd1Q3UZA1 412 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 PighQ5M9N4 188 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Hif1aQ61221 836 aaKnown RBP11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Itih3Q61704 889 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Gdpd5Q640M6 607 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Fam107aQ78TU8 144 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Sec24bQ80ZX0 1251 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Q8BGA7 448 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Spata21Q8BHW6 681 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Lrrc19Q8BZT5 364 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Trim35Q8C006 501 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Atg16l1Q8C0J2 607 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Lamtor4Q8CF66 99 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Trip11E9Q512 1976 aa11.99□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Apol11aE9PZG0 334 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Tgfb2P27090 414 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Stx3Q64704 289 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Sp140Q6NSQ5 534 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Agbl2Q8CDK2 862 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 PlvapQ91VC4 438 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Ino80bQ99PT3 375 aaKnown RBP11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 SerhlQ9EPB5 311 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Map3k20Q9ESL4 802 aaKnown RBP11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Atp6v0a1Q9Z1G4 839 aaKnown RBP11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Zfp990B1AVN5 605 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Cyp2a22B2RXZ2 492 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Gm44503E9PYU5 387 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Zfp105G3X9I0 524 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Grpel2O88396 224 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Lta4hP24527 611 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Alox15P39654 663 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Shmt1P50431 478 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Q3TQQ9 903 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Trpv1Q704Y3 839 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Nat14Q8BVG8 206 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Slc38a7Q8BWH0 463 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Trub1Q8C0D0 338 aaKnown RBP11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Zfp62Q8C827 914 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Irak3Q8K4B2 609 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Gga1Q8R0H9 635 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Otud7aQ8R554 926 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Ap2b1Q9DBG3 937 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Chst7Q9EP78 484 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Pck1Q9Z2V4 622 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Itgb4A2A863 1818 aa11.98□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Arhgef37A1IGU4 676 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Serpinb3aG3X9V8 387 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 IapP03975 557 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Hoxc10P31257 342 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Nr2c2P49117 596 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 NcstnP57716 708 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Gabrb2P63137 512 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Gabbr2Q80T41 940 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Lrrc24Q8BHA1 521 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Pi4kbQ8BKC8 816 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Kctd15Q8K0E1 283 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Clptm1Q8VBZ3 664 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Zcchc18Q8VD24 393 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 FtcdQ91XD4 541 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Med7Q9CZB6 233 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 RpgrQ9R0X5 1001 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Mfsd4b4J3QNS5 503 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Ebf3O08791 596 aa11.97□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Pik3r2O08908 722 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms