RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Pus7lQ8CE46 702 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mterf1aQ8CHZ9 379 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mgat5Q8R4G6 740 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zcchc18Q8VD24 393 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Uba5Q8VE47 403 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pstpip2Q99M15 334 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zmat5Q9CQR5 170 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 MesdQ9ERE7 224 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Wdr12Q9JJA4 423 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gli3Q61602 1583 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tbkbp1A2A9T0 611 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 PotegA5H0M4 473 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zscan4bE9Q3G0 505 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 4930579F01RikE9Q3L6 325 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Raph1F2Z3U3 1266 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 MntO08789 591 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Emp3O35912 163 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 DtnbO70585 659 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 VdrP48281 422 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Wdhd1P59328 1117 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slc27a5Q4LDG0 689 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nup62Q63850 526 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nme8Q715T0 586 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zswim6Q80TB7 1207 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 QpctlQ8BH73 383 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tmem74Q8BQU7 305 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Atg16l1Q8C0J2 607 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cstf2tQ8C7E9 632 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Myef2Q8C854 591 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Asb2Q8K0L0 634 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ncoa5Q91W39 579 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 WacQ924H7 646 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mta3Q924K8 591 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Arhgef25Q9CWR0 618 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ddah1Q9CWS0 285 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ttc25Q9D4B2 624 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 CenpkQ9ESN5 271 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ubr2Q6WKZ8 1755 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Klhl18A0A0G2JGN5 579 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm5737A0A140LI11 423 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 1700016G14RikA0A286YCZ6 238 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dennd3A2RT67 1274 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tex16F6WNY1 1150 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Vmn2r2L7N2E9 908 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ikzf3O08900 507 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 CrcpO35427 148 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Stmn3O70166 180 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tnni2P13412 182 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gnl1P36916 607 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Adamts19P59509 1210 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Stx1bP61264 288 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ank1Q02357 1862 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ak8Q32M07 479 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ccdc51Q3URS9 406 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Klf2Q60843 354 aaKnown RBP10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Madcam1Q61826 405 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ddr2Q62371 854 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ankrd6Q69ZU8 712 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 March6Q6ZQ89 909 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Abcg2Q7TMS5 657 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Amigo1Q80ZD8 492 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Wwp1Q8BZZ3 918 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tlk1Q8C0V0 766 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Sfrp1Q8C4U3 314 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Rsad2Q8CBB9 362 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tfb1mQ8JZM0 345 aaKnown RBP10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Plcl2Q8K394 1128 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zcchc9Q8R1J3 271 aaKnown RBP10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Uroc1Q8VC12 676 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pacsin3Q99JB8 424 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kremen1Q99N43 473 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Prl8a9Q9CQ58 241 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 4930513O06RikQ9D549 161 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cnbd2Q9D5U8 673 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 TcimQ9D915 106 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Scyl3Q9DBQ7 735 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 PgdQ9DCD0 483 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 KelQ9EQF2 713 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nr2e3Q9QXZ7 395 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slc26a4Q9R155 780 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Lbhd1A0A087WPA0 259 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zscan4eA0A1B0GRE8 505 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Rabgap1A2AWA9 1064 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Prr16A3KMN5 304 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm10406A6NAS4 205 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3373A6NAS7 205 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3252E9PUT9 216 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3002E9PW72 216 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3298E9PW80 205 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Vmn2r79E9Q067 851 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3468E9QAJ8 216 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3667K7N757 205 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Phka1P18826 1241 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slc2a3P32037 493 aaKnown RBP10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Stat3P42227 770 aaKnown RBP10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nr2f2P43135 414 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 HdgfP51859 237 aaKnown RBP10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Btbd3P58545 530 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 NxnP97346 435 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nr4a2Q06219 598 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms