RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Klhl18A0A0G2JGN5 579 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Olfr1410E9PYK6 323 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 NagluO88325 739 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lancl1O89112 399 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 TpbpaP13438 124 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Irs1P35569 1233 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 IduaP48441 634 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 PmlQ60953 885 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 StilQ60988 1262 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Hesx1Q61658 185 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cntn4Q69Z26 1026 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Bud31Q6PGH1 103 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dalrd3Q6PJN8 538 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rab3gap1Q80UJ7 981 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Slitrk3Q810B9 980 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tmco6Q8BQX5 494 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tmtc3Q8BRH0 920 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gpr89aQ8BS95 455 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lpcat2Q8BYI6 544 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dis3l2Q8CI75 870 aaKnown RBP9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Enox2Q8R0Z2 598 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Haus8Q99L00 373 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 GarsQ9CZD3 729 aaKnown RBP9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lipt2Q9D009 231 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tmem160Q9D938 188 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cntn6Q9JMB8 1028 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 UxtQ9WTZ0 157 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm16368A0A1Y7VNG9 144 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zbed5B2RPU8 756 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 D3Z070 196 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ccdc144bE9PVZ3 520 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 YwhazP63101 245 aaKnown RBP9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Surf6P70279 355 aaKnown RBP9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Fam47cQ14BE7 430 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Spdye4aQ5IBH6 268 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Taar7aQ5QD12 358 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Grb10Q60760 621 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 TfrcQ62351 763 aaKnown RBP9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Arhgap20Q6IFT4 1182 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zfp943Q6NZP4 507 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pik3c3Q6PF93 887 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dsg1cQ7TSF0 911 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Anks1bQ8BIZ1 1259 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Hps6Q8BLY7 805 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Agap1Q8BXK8 857 aaKnown RBP9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Alg1Q921Q3 482 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mrpl49Q9CQ40 166 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Snf8Q9CZ28 258 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Antxr1Q9CZ52 562 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 4921524L21RikQ9D5T2 438 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gprc5dQ9JIL6 344 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Serpini2Q9JK88 405 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 ChmlQ9QZD5 621 aa9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pdcd6ipQ9WU78 869 aaKnown RBP9.45□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cyp2a22B2RXZ2 492 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm10639E9Q6L7 222 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 NmbrO54799 390 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Trappc3O55013 180 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Sult6b1P0CC03 303 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Eno2P17183 434 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Aco1P28271 889 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ephb2P54763 986 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ube2iP63280 158 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mettl17Q3U2U7 461 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Garnl3Q3V0G7 1038 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Opa3Q505D7 179 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mum1Q6DID5 682 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Heatr6Q6P1G0 1184 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Psd2Q6P1I6 770 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Unc5clQ6R653 518 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Glra2Q7TNC8 452 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rassf6Q80UQ2 353 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zbtb42Q811H0 420 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Fam221aQ8C790 301 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Fate1Q8CEK7 99 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Trpv3Q8K424 791 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Znrd1-asQ8R0E5 213 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 EcdQ9CS74 641 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Grtp1Q9D3N8 359 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Alg2Q9DBE8 415 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 CarsQ9ER72 831 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dkc1Q9ESX5 509 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Stk4Q9JI11 487 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mpp5Q9JLB2 675 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tlr5Q9JLF7 859 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Kdm6aO70546 1401 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ahnak2E9PYB0 1738 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Armt1A6H630 439 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cyp3a57D3YYZ0 503 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm8994E9PV04 411 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Vmn2r18E9Q280 788 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Sec24cG3X972 1096 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Syn1O88935 706 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Timp2P25785 220 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gna14P30677 355 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 LmnaP48678 665 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 AhcyP50247 432 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Eef2P58252 858 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gdf9Q07105 441 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 MyzapQ3UIJ9 466 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms