RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 PtpraP18052 829 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Gsta4P24472 222 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cd180Q62192 661 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Dync1li2Q6PDL0 492 aaKnown RBP15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Zfp454Q80Y34 536 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Pi4kbQ8BKC8 816 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Slc9a4Q8BUE1 797 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Wdr27Q8C5V5 780 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Uba3Q8C878 462 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Trim61Q8JZK6 461 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ddx1Q91VR5 740 aaKnown RBP15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Bace2Q9JL18 514 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 B4galt5Q9JMK0 388 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Magel2Q9QZ04 1284 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 HnrnpcQ9Z204 313 aaKnown RBP15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 C130060K24RikG3UWA8 416 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Akap1O08715 857 aaKnown RBP15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Timm44O35857 452 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 UmpsP13439 481 aaKnown RBP15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 ItgalP24063 1163 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Gata6Q61169 589 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Sv2cQ69ZS6 727 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cypt2Q6P924 180 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Usp1Q8BJQ2 784 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Pgm2l1Q8CAA7 621 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Rmnd1Q8CI78 450 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Pdk3Q922H2 415 aaKnown RBP15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 PompQ9CQT5 141 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 4933428M09RikQ9D3X3 192 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Lima1Q9ERG0 753 aaKnown RBP15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 ParvbQ9ES46 365 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Mpp5Q9JLB2 675 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Dlc1Q9R0Z9 1092 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Pdpk1Q9Z2A0 559 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Vmn2r25W4VSP2 855 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Klhl41A2AUC9 606 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Gm20721E9Q2U8 318 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cyp2a4P15392 494 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cyp2a5P20852 494 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Crhr1P35347 415 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Itm2aQ61500 263 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Gdpd5Q640M6 607 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ankrd6Q69ZU8 712 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Acot5Q6Q2Z6 421 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Echs1Q8BH95 290 aaKnown RBP15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Fbxw8Q8BIA4 598 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Gpr150Q8BL07 427 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Mettl21cQ8BLU2 248 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Washc5Q8C2E7 1159 aaKnown RBP15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ccdc159Q8C963 411 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Trappc12Q8K2L8 797 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Mrpl58Q8R035 206 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Olfr385Q8VGT1 312 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Nme5Q99MH5 211 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 AadacQ99PG0 398 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Smyd3Q9CWR2 428 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tubb3Q9ERD7 450 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Prl2a1Q9JHK0 228 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 NumbQ9QZS3 653 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cry2Q9R194 592 aa15.53■□□□□ 0.08
Nup54-201ENSMUST00000038514 Arhgef37A1IGU4 676 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 D3Z070 196 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 1700064H15RikD3Z4D4 81 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 PtproE9Q612 1226 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 MttpO08601 894 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Atp5bP56480 529 aaKnown RBP15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ikzf1Q03267 517 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 McuQ3UMR5 350 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Hsph1Q61699 858 aaKnown RBP15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cyp2c29Q64458 490 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Atp6v0d2Q80SY3 350 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Qsox1Q8BND5 748 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tyw3Q8BSA9 257 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Trerf1Q8BXJ2 1205 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Zfp62Q8C827 914 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Coq6Q8R1S0 476 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Alg9Q8VDI9 611 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Spats2lQ91WJ7 558 aaKnown RBP15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Commd8Q9CZG3 183 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Scyl3Q9DBQ7 735 aa15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 Atp6v0a1Q9Z1G4 839 aaKnown RBP15.52■□□□□ 0.08
Nup54-201ENSMUST00000038514 AlpiF8VPQ6 554 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Adam15O88839 864 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gnl1P36916 607 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 S100bP50114 92 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Yy1Q00899 414 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Serpina6Q06770 397 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Pdp2Q504M2 532 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Trim38Q5SZ99 471 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Klra8Q60682 266 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 FcgrtQ61559 365 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Stx3Q64704 289 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Txndc8Q69AB2 127 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Q6GQV0 436 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Clptm1Q8VBZ3 664 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Lman1lQ8VCD3 505 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Pcdhb4Q91XZ6 784 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gins2Q9D600 185 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 MrgbpQ9DAT2 204 aa15.51■□□□□ 0.07
Nup54-201ENSMUST00000038514 Gdap2Q9DBL2 498 aa15.51■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms