RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 ApoeP08226 311 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Psmc6P62334 389 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Trim63Q38HM4 350 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Mfn2Q80U63 757 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Rnaseh2bQ80ZV0 308 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Rassf9Q8K342 435 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Lpgat1Q91YX5 370 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 FdpsQ920E5 353 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Spag6Q9JLI7 507 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Bmp10Q9R229 421 aa17.23■□□□□ 0.35
Col17a1-201ENSMUST00000026045 MndalD0QMC3 538 aaKnown RBP17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 HexdcQ3U4H6 486 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Mapk10Q61831 464 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Fbxo28Q8BIG4 368 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Slc25a38Q91XD8 326 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Glra3Q91XP5 464 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Pla2g12bQ99P27 195 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 NenfQ9CQ45 171 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gtf2h1Q9DBA9 547 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Ctnnd2O35927 1247 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Abcb1bP06795 1276 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 GuloP58710 440 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Fam47cQ14BE7 430 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Mical2Q8BML1 960 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gpc5Q8CAL5 572 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 PrameQ9D4Z5 464 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Doc2gQ9ESN1 387 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Nme3Q9WV85 169 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Zc3h13E9Q784 1729 aaKnown RBP17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Krt6aP50446 553 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Sesn1P58006 492 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Krt2Q3TTY5 707 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Fam129aQ3UW53 926 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Ccdc85aQ5SP85 500 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Far1Q922J9 515 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Mrpl28Q9D1B9 257 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Rad18Q9QXK2 509 aaKnown RBP17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm8897L7N294 181 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Pik3r2O08908 722 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 UmpsP13439 481 aaKnown RBP17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Zfy2P20662 777 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Nudt16Q6P3D0 195 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Plekha4Q8VC98 588 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Nr3c2Q8VII8 978 aa17.22■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Tpst1O70281 370 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Alox5P48999 674 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Rit2P70425 217 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Nlrc4Q3UP24 1024 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 D630036H23RikQ3UQD6 204 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Atp13a4Q5XF90 1193 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Trappc12Q8K2L8 797 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Oxnad1Q8VE38 311 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Q9D2Q3 444 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Cyp39a1Q9JKJ9 470 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Veph1A1A535 833 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Acnat1A2AKK5 416 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 S100zB9EJL3 99 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Clca3bE9PUL3 1044 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Zfp275G3X904 499 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm21897J3KMP5 500 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm21750L7N228 499 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Srpk1O70551 648 aaKnown RBP17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Alox12P39655 663 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 SftpdP50404 374 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Atp5bP56480 529 aaKnown RBP17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 PrkcbP68404 671 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Cep78Q6IRU7 790 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Tas2r134Q7TQB0 298 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Rbm12b1Q80YR9 836 aaKnown RBP17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Phf20Q8BLG0 1010 aaKnown RBP17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Btbd9Q8C726 612 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Ago4Q8CJF8 861 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Aldh1b1Q9CZS1 519 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Serpinb1aQ9D154 379 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Zfyve9A2A8R0 1397 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm7682A0A0J9YUM1 481 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Ace3D0G895 737 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Vmn2r87E9PZX4 848 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Scn1bP97952 218 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Aars2Q14CH7 980 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Fam187aQ9D3R5 417 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 AdgbG3UZ78 1657 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Vwa5b1A9Z1V5 1215 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm8011K7N6Y5 207 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 CnpP16330 420 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gsdmc2Q2KHK6 480 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 9130409I23RikQ3TS87 320 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Znf746Q3U133 652 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Trmt10cQ3UFY8 414 aaKnown RBP17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gdpd5Q640M6 607 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Moxd2Q7TT41 619 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Samd4aQ8CBY1 711 aaKnown RBP17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Clip4Q8CI96 704 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Wrap53Q8VC51 532 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Fastkd2Q922E6 689 aaKnown RBP17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Sike1Q9CPR7 207 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 CtsrQ9JIA9 334 aa17.21■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Cyp2c69E9PXC3 491 aa17.21■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Msh3P13705 1091 aa17.21■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Cyp2c40P56657 491 aa17.21■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 90.3 ms