RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Map4k3Q99JP0 894 aa12.46□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Homer3Q99JP6 356 aa12.46□□□□□ -0.42
Rfx1-201ENSMUST00000005600 PompQ9CQT5 141 aa12.46□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Sugt1Q9CX34 336 aa12.46□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Msh5Q9QUM7 833 aa12.46□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Iqcj-Schip1A0A088MLT8 559 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Taf4E9QAP7 1042 aaKnown RBP12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Schip1P0DPB4 484 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Hspa1lP16627 641 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Slc10a3P21129 473 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Glb1P23780 647 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Prim2P33610 505 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ndufs6P52503 116 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Atp5bP56480 529 aaKnown RBP12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Smad1P70340 465 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Msx3P70354 204 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Slc26a2Q62273 739 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 CbarpQ66L44 698 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Plppr4Q7TME0 766 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Adgra1Q8C4G9 578 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Gstm4Q8R5I6 218 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 TtpalQ9D3D0 343 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Jph2Q9ET78 696 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ccr10Q9JL21 362 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 MttpO08601 894 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Pik3r2O08908 722 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 MafgO54790 162 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Hoxb8P09632 243 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Rps6ka3P18654 740 aaKnown RBP12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ptpn11P35235 597 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Sh3bp2Q06649 559 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Mrgprx2Q3UG50 352 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Psg28Q4KL66 472 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Foxn1Q61575 648 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 LbpQ61805 481 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Atg9bQ6EBV9 922 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Pcmtd2Q8BHD8 359 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ccdc151Q8BSN3 593 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Unc45bQ8CGY6 931 aaKnown RBP12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Taco1Q8K0Z7 294 aaKnown RBP12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Necab2Q91ZP9 389 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Abcg8Q9DBM0 673 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Rabgap1lA6H6A9 815 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Gm10801F7C7Q0 168 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ebf3O08791 596 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 GclmO09172 274 aaKnown RBP12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 ChkaO54804 453 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Cd180Q62192 661 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Dusp16Q6PCP3 660 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Rpf1Q7TND5 349 aaKnown RBP12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Fam163bQ8BUM6 167 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Myoz3Q8R4E4 245 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Pcdhb4Q91XZ6 784 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Catsper1Q91ZR5 686 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Dnajc18Q9CZJ9 357 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 DcpsQ9DAR7 338 aa12.45□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Olfr611K7N609 323 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Olfr612L7N462 323 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Pex2P55098 305 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Fermt1P59113 677 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Smyd5Q3TYX3 416 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Hace1Q3U0D9 909 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Rnf220Q6PDX6 566 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 LdhdQ7TNG8 484 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Olfr299Q7TS05 330 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Atp6v0d2Q80SY3 350 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Tbx10Q810F8 385 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Trim61Q8JZK6 461 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Dync1li1Q8R1Q8 523 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Dmap1Q9JI44 468 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Itgb4A2A863 1818 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Smok3cA0A087WSF2 504 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Olfr271-ps1A0A1L1SQH2 283 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Tatdn2B7ZNL9 783 aaKnown RBP12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Gm5689F6Y2A6 97 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Cdk7Q03147 346 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Mark2Q05512 776 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Mex3cQ05A36 652 aaKnown RBP12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Grid2ipQ0QWG9 1203 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Acot5Q6Q2Z6 421 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ppme1Q8BVQ5 386 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Znf428Q8C1M2 176 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Lin52Q8CD94 116 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Akr1c14Q91WT7 323 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 TfQ921I1 697 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Trps1Q925H1 1281 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ndc80Q9D0F1 642 aaKnown RBP12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Rfx5Q9JL61 658 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Atrnl1Q6A051 1378 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ttc30a2A2AKQ8 664 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Kif6E9PX57 802 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Foxm1O08696 760 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Pgk1P09411 417 aaKnown RBP12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Ranbp9P69566 653 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Foxd4Q60688 444 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Itm2aQ61500 263 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Grid2Q61625 1007 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Usp8Q80U87 1080 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Lamtor4Q8CF66 99 aa12.44□□□□□ -0.42
Rfx1-201ENSMUST00000005600 Sorcs3Q8VI51 1219 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms