RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C CUP1-2P0CX81 61 aa0.55□□□□□ -2.32
VPS71YML041C TY1B-DR4Q07793 1604 aa0.55□□□□□ -2.32
VPS71YML041C YDR524C-BQ3E6R4 66 aa0.54□□□□□ -2.32
VPS71YML041C VPS13Q07878 3144 aa0.54□□□□□ -2.32
VPS71YML041C IRA2P19158 3079 aa0.53□□□□□ -2.32
VPS71YML041C YBT1P32386 1661 aa0.53□□□□□ -2.32
VPS71YML041C YOR192C-CQ3E736 78 aa0.52□□□□□ -2.33
VPS71YML041C TOR2P32600 2474 aaKnown RBP0.51□□□□□ -2.33
VPS71YML041C CDC25P04821 1589 aa0.49□□□□□ -2.33
VPS71YML041C YLL006W-AQ3E814 58 aa0.48□□□□□ -2.33
VPS71YML041C YGL258W-AQ3E740 77 aa0.47□□□□□ -2.33
VPS71YML041C IRA1P18963 3092 aa0.47□□□□□ -2.33
VPS71YML041C SPT6P23615 1451 aaKnown RBP0.44□□□□□ -2.34
VPS71YML041C SSK2P53599 1579 aa0.43□□□□□ -2.34
VPS71YML041C SNQ2P32568 1501 aaKnown RBP0.42□□□□□ -2.34
VPS71YML041C YOR072W-BQ3E832 53 aa0.41□□□□□ -2.34
VPS71YML041C YOR093CQ12275 1648 aa0.41□□□□□ -2.34
VPS71YML041C NUP188P52593 1655 aaKnown RBP0.4□□□□□ -2.34
VPS71YML041C MEC1P38111 2368 aa0.38□□□□□ -2.35
VPS71YML041C DYN1P36022 4092 aa0.38□□□□□ -2.35
VPS71YML041C YPR010C-AA5Z2X5 72 aa0.36□□□□□ -2.35
VPS71YML041C CSF1Q12150 2958 aa0.36□□□□□ -2.35
VPS71YML041C USO1P25386 1790 aa0.36□□□□□ -2.35
VPS71YML041C YDR034W-BQ6Q5X2 51 aa0.35□□□□□ -2.35
VPS71YML041C PEP1P32319 1579 aa0.34□□□□□ -2.36
VPS71YML041C HIR3P47171 1648 aa0.34□□□□□ -2.36
VPS71YML041C NUP192P47054 1683 aa0.27□□□□□ -2.37
VPS71YML041C THO2P53552 1597 aaKnown RBP0.26□□□□□ -2.37
VPS71YML041C BUD3P25558 1636 aa0.26□□□□□ -2.37
VPS71YML041C ULS1Q08562 1619 aa0.26□□□□□ -2.37
VPS71YML041C TRA1P38811 3744 aa0.26□□□□□ -2.37
VPS71YML041C YBR056W-AI2HB52 66 aa0.22□□□□□ -2.37
VPS71YML041C YHR050W-AQ05451 56 aa0.18□□□□□ -2.38
VPS71YML041C STU1P38198 1513 aa0.16□□□□□ -2.38
VPS71YML041C RKR1Q04781 1562 aa0.15□□□□□ -2.39
VPS71YML041C YOR316C-AQ3E806 69 aa0.12□□□□□ -2.39
VPS71YML041C NUP170P38181 1502 aa0.11□□□□□ -2.39
VPS71YML041C GCN2P15442 1659 aa0.11□□□□□ -2.39
VPS71YML041C ATG2P53855 1592 aa0.08□□□□□ -2.4
VPS71YML041C CHC1P22137 1653 aaKnown RBP0.05□□□□□ -2.4
VPS71YML041C FIG2P25653 1609 aa0.05□□□□□ -2.4
VPS71YML041C COX9P07255 59 aa0.03□□□□□ -2.4
VPS71YML041C FLO1P32768 1537 aa-0.03□□□□□ -2.41
VPS71YML041C YDR034C-AP0C289 58 aa-0.04□□□□□ -2.42
VPS71YML041C YIL046W-AQ3E7Z4 54 aa-0.04□□□□□ -2.42
VPS71YML041C DDR2P89113 61 aa-0.07□□□□□ -2.42
VPS71YML041C YJL133C-AQ3E7A3 74 aa-0.08□□□□□ -2.42
VPS71YML041C YLR342W-AQ3E810 57 aa-0.11□□□□□ -2.43
VPS71YML041C RPL29P05747 59 aaPredicted RBP-0.15□□□□□ -2.43
VPS71YML041C Q0017Q9ZZX8 53 aa-0.16□□□□□ -2.44
VPS71YML041C YML054C-AQ3E809 52 aa-0.21□□□□□ -2.44
VPS71YML041C Q0297Q9ZZV8 51 aa-0.21□□□□□ -2.44
VPS71YML041C MLP2P40457 1679 aa-0.24□□□□□ -2.45
VPS71YML041C YHR073W-AP0C5N7 58 aa-0.32□□□□□ -2.46
VPS71YML041C SMX2P40204 77 aaKnown RBP-0.33□□□□□ -2.46
VPS71YML041C YJL127C-BQ3E828 52 aa-0.41□□□□□ -2.48
VPS71YML041C YLL066W-BQ8TGJ7 56 aa-0.5□□□□□ -2.49
VPS71YML041C HOR7Q05827 59 aa-0.58□□□□□ -2.5
VPS71YML041C YMR105W-AQ8TGS8 64 aa-0.58□□□□□ -2.5
VPS71YML041C RPL39P04650 51 aa-0.63□□□□□ -2.51
VPS71YML041C TOM7P53507 60 aa-0.65□□□□□ -2.51
VPS71YML041C PMP3P87284 55 aa-0.65□□□□□ -2.51
VPS71YML041C NCE101Q02820 53 aa-0.67□□□□□ -2.52
Retrieved 63 of 5,963 RNA–protein pairs in 6.4 ms