RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C YPR117WQ06116 2489 aa-0.26□□□□□ -2.45
RPL40BYKR094C PDR5P33302 1511 aaKnown RBP-0.27□□□□□ -2.45
RPL40BYKR094C YFR010W-AP0C5N0 62 aa-0.27□□□□□ -2.45
RPL40BYKR094C MEC1P38111 2368 aa-0.28□□□□□ -2.45
RPL40BYKR094C YOR192C-CQ3E736 78 aa-0.29□□□□□ -2.46
RPL40BYKR094C FIG2P25653 1609 aa-0.3□□□□□ -2.46
RPL40BYKR094C NUP188P52593 1655 aaKnown RBP-0.3□□□□□ -2.46
RPL40BYKR094C THO2P53552 1597 aaKnown RBP-0.31□□□□□ -2.46
RPL40BYKR094C YPR010C-AA5Z2X5 72 aa-0.31□□□□□ -2.46
RPL40BYKR094C BUD3P25558 1636 aa-0.31□□□□□ -2.46
RPL40BYKR094C SSK2P53599 1579 aa-0.32□□□□□ -2.46
RPL40BYKR094C CDC25P04821 1589 aa-0.32□□□□□ -2.46
RPL40BYKR094C YOR316C-AQ3E806 69 aa-0.34□□□□□ -2.46
RPL40BYKR094C USO1P25386 1790 aa-0.34□□□□□ -2.46
RPL40BYKR094C DYN1P36022 4092 aa-0.36□□□□□ -2.47
RPL40BYKR094C SPT6P23615 1451 aaKnown RBP-0.36□□□□□ -2.47
RPL40BYKR094C NUP192P47054 1683 aa-0.37□□□□□ -2.47
RPL40BYKR094C TEL1P38110 2787 aa-0.37□□□□□ -2.47
RPL40BYKR094C FLO1P32768 1537 aa-0.39□□□□□ -2.47
RPL40BYKR094C NUP170P38181 1502 aa-0.39□□□□□ -2.47
RPL40BYKR094C ATG2P53855 1592 aa-0.4□□□□□ -2.47
RPL40BYKR094C STU1P38198 1513 aa-0.4□□□□□ -2.47
RPL40BYKR094C MON2P48563 1636 aaPredicted RBP-0.41□□□□□ -2.47
RPL40BYKR094C YDR034C-AP0C289 58 aa-0.41□□□□□ -2.48
RPL40BYKR094C Q0017Q9ZZX8 53 aa-0.41□□□□□ -2.48
RPL40BYKR094C PEP1P32319 1579 aa-0.42□□□□□ -2.48
RPL40BYKR094C ULS1Q08562 1619 aa-0.42□□□□□ -2.48
RPL40BYKR094C GCN2P15442 1659 aa-0.43□□□□□ -2.48
RPL40BYKR094C RKR1Q04781 1562 aa-0.44□□□□□ -2.48
RPL40BYKR094C HIR3P47171 1648 aa-0.44□□□□□ -2.48
RPL40BYKR094C RPL29P05747 59 aaPredicted RBP-0.44□□□□□ -2.48
RPL40BYKR094C COX9P07255 59 aa-0.44□□□□□ -2.48
RPL40BYKR094C YBR056W-AI2HB52 66 aa-0.45□□□□□ -2.48
RPL40BYKR094C YML054C-AQ3E809 52 aa-0.45□□□□□ -2.48
RPL40BYKR094C DDR2P89113 61 aa-0.48□□□□□ -2.49
RPL40BYKR094C GCN1P33892 2672 aaKnown RBP-0.5□□□□□ -2.49
RPL40BYKR094C MDN1Q12019 4910 aaKnown RBP-0.51□□□□□ -2.49
RPL40BYKR094C YJL133C-AQ3E7A3 74 aa-0.51□□□□□ -2.49
RPL40BYKR094C YLR342W-AQ3E810 57 aa-0.53□□□□□ -2.49
RPL40BYKR094C YHR073W-AP0C5N7 58 aa-0.54□□□□□ -2.5
RPL40BYKR094C CUP1-1P0CX80 61 aa-0.56□□□□□ -2.5
RPL40BYKR094C CUP1-2P0CX81 61 aa-0.56□□□□□ -2.5
RPL40BYKR094C TRA1P38811 3744 aa-0.57□□□□□ -2.5
RPL40BYKR094C CSF1Q12150 2958 aa-0.58□□□□□ -2.5
RPL40BYKR094C SMX2P40204 77 aaKnown RBP-0.65□□□□□ -2.51
RPL40BYKR094C YJL127C-BQ3E828 52 aa-0.66□□□□□ -2.52
RPL40BYKR094C YMR105W-AQ8TGS8 64 aa-0.67□□□□□ -2.52
RPL40BYKR094C IRA1P18963 3092 aa-0.68□□□□□ -2.52
RPL40BYKR094C NUM1Q00402 2748 aa-0.7□□□□□ -2.52
RPL40BYKR094C PMP3P87284 55 aa-0.74□□□□□ -2.53
RPL40BYKR094C CHC1P22137 1653 aaKnown RBP-0.75□□□□□ -2.53
RPL40BYKR094C MLP2P40457 1679 aa-0.8□□□□□ -2.54
RPL40BYKR094C IRA2P19158 3079 aa-0.8□□□□□ -2.54
RPL40BYKR094C HOR7Q05827 59 aa-0.81□□□□□ -2.54
RPL40BYKR094C VPS13Q07878 3144 aa-0.87□□□□□ -2.55
RPL40BYKR094C TOM7P53507 60 aa-0.91□□□□□ -2.56
RPL40BYKR094C YLL066W-BQ8TGJ7 56 aa-0.94□□□□□ -2.56
RPL40BYKR094C NCE101Q02820 53 aa-1.1□□□□□ -2.59
RPL40BYKR094C TOM1Q03280 3268 aa-1.35□□□□□ -2.63
RPL40BYKR094C RPL39P04650 51 aa-1.44□□□□□ -2.64
RPL40BYKR094C YIL046W-AQ3E7Z4 54 aa-1.71□□□□□ -2.68
RPL40BYKR094C Q0297Q9ZZV8 51 aa-1.71□□□□□ -2.68
RPL40BYKR094C YDR034W-BQ6Q5X2 51 aa-2.55□□□□□ -2.82
Retrieved 63 of 5,963 RNA–protein pairs in 6.9 ms