RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W SIP18P50263 79 aa0.47□□□□□ -2.33
SHR3YDL212W CSF1Q12150 2958 aa0.47□□□□□ -2.33
SHR3YDL212W HIR3P47171 1648 aa0.46□□□□□ -2.34
SHR3YDL212W YOR192C-CQ3E736 78 aa0.46□□□□□ -2.34
SHR3YDL212W YOR008C-AQ3E7B9 74 aa0.46□□□□□ -2.34
SHR3YDL212W TRA1P38811 3744 aa0.46□□□□□ -2.34
SHR3YDL212W MEC1P38111 2368 aa0.45□□□□□ -2.34
SHR3YDL212W SPT6P23615 1451 aaKnown RBP0.44□□□□□ -2.34
SHR3YDL212W TOS6P48560 102 aa0.44□□□□□ -2.34
SHR3YDL212W YOR093CQ12275 1648 aa0.43□□□□□ -2.34
SHR3YDL212W TY1B-DR4Q07793 1604 aa0.42□□□□□ -2.34
SHR3YDL212W CDC25P04821 1589 aa0.42□□□□□ -2.34
SHR3YDL212W SPO14P36126 1683 aa0.42□□□□□ -2.34
SHR3YDL212W SNQ2P32568 1501 aaKnown RBP0.42□□□□□ -2.34
SHR3YDL212W YGR146C-AQ8TGT9 53 aa0.41□□□□□ -2.34
SHR3YDL212W YBT1P32386 1661 aa0.4□□□□□ -2.34
SHR3YDL212W RPS29AP41057 56 aaKnown RBP0.39□□□□□ -2.35
SHR3YDL212W SSK2P53599 1579 aa0.37□□□□□ -2.35
SHR3YDL212W YDR034W-BQ6Q5X2 51 aa0.37□□□□□ -2.35
SHR3YDL212W NUP188P52593 1655 aaKnown RBP0.33□□□□□ -2.36
SHR3YDL212W YPR010C-AA5Z2X5 72 aa0.33□□□□□ -2.36
SHR3YDL212W YDR524C-BQ3E6R4 66 aa0.33□□□□□ -2.36
SHR3YDL212W COA2Q3E823 68 aa0.31□□□□□ -2.36
SHR3YDL212W PEP1P32319 1579 aa0.3□□□□□ -2.36
SHR3YDL212W ULS1Q08562 1619 aa0.3□□□□□ -2.36
SHR3YDL212W THO2P53552 1597 aaKnown RBP0.29□□□□□ -2.36
SHR3YDL212W YLL006W-AQ3E814 58 aa0.29□□□□□ -2.36
SHR3YDL212W NUP192P47054 1683 aa0.26□□□□□ -2.37
SHR3YDL212W USO1P25386 1790 aa0.26□□□□□ -2.37
SHR3YDL212W BUD3P25558 1636 aa0.25□□□□□ -2.37
SHR3YDL212W YGL258W-AQ3E740 77 aa0.25□□□□□ -2.37
SHR3YDL212W YOR072W-BQ3E832 53 aa0.25□□□□□ -2.37
SHR3YDL212W RKR1Q04781 1562 aa0.23□□□□□ -2.37
SHR3YDL212W NUP170P38181 1502 aa0.22□□□□□ -2.37
SHR3YDL212W GCN2P15442 1659 aa0.21□□□□□ -2.38
SHR3YDL212W STU1P38198 1513 aa0.21□□□□□ -2.38
SHR3YDL212W ATG2P53855 1592 aa0.17□□□□□ -2.38
SHR3YDL212W YOR316C-AQ3E806 69 aa0.17□□□□□ -2.38
SHR3YDL212W FIG2P25653 1609 aa0.16□□□□□ -2.38
SHR3YDL212W CHC1P22137 1653 aaKnown RBP0.15□□□□□ -2.39
SHR3YDL212W COX9P07255 59 aa0.12□□□□□ -2.39
SHR3YDL212W YHR050W-AQ05451 56 aa0.12□□□□□ -2.39
SHR3YDL212W YJL133C-AQ3E7A3 74 aa0.11□□□□□ -2.39
SHR3YDL212W YLR342W-AQ3E810 57 aa0.11□□□□□ -2.39
SHR3YDL212W DDR2P89113 61 aa0.1□□□□□ -2.39
SHR3YDL212W FLO1P32768 1537 aa0.08□□□□□ -2.4
SHR3YDL212W YDR034C-AP0C289 58 aa0.07□□□□□ -2.4
SHR3YDL212W RPL29P05747 59 aaPredicted RBP0.02□□□□□ -2.41
SHR3YDL212W SMX2P40204 77 aaKnown RBP-0.01□□□□□ -2.41
SHR3YDL212W YHR073W-AP0C5N7 58 aa-0.02□□□□□ -2.41
SHR3YDL212W Q0017Q9ZZX8 53 aa-0.02□□□□□ -2.41
SHR3YDL212W YML054C-AQ3E809 52 aa-0.05□□□□□ -2.42
SHR3YDL212W YJL127C-BQ3E828 52 aa-0.05□□□□□ -2.42
SHR3YDL212W MLP2P40457 1679 aa-0.07□□□□□ -2.42
SHR3YDL212W YIL046W-AQ3E7Z4 54 aa-0.1□□□□□ -2.43
SHR3YDL212W TOM7P53507 60 aa-0.17□□□□□ -2.44
SHR3YDL212W PMP3P87284 55 aa-0.21□□□□□ -2.44
SHR3YDL212W HOR7Q05827 59 aa-0.25□□□□□ -2.45
SHR3YDL212W Q0297Q9ZZV8 51 aa-0.26□□□□□ -2.45
SHR3YDL212W YMR105W-AQ8TGS8 64 aa-0.36□□□□□ -2.47
SHR3YDL212W NCE101Q02820 53 aa-0.43□□□□□ -2.48
SHR3YDL212W YLL066W-BQ8TGJ7 56 aa-0.45□□□□□ -2.48
SHR3YDL212W RPL39P04650 51 aa-0.7□□□□□ -2.52
Retrieved 63 of 5,963 RNA–protein pairs in 25.9 ms