RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 CCDC153Q494R4 210 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 ZNF697Q5TEC3 545 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 CENPUQ71F23 418 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 MRPL10Q7Z7H8 261 aaKnown RBP5.91□□□□□ -1.46
RTTN-218ENST00000640408 KIRREL3Q8IZU9 778 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 LEMD2Q8NC56 503 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 HERVK_113Q902F9 699 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 ADAMTS10Q9H324 1103 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 GCNT4Q9P109 453 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 ATP8A1Q9Y2Q0 1164 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 USP15Q9Y4E8 981 aaPredicted RBP5.91□□□□□ -1.46
RTTN-218ENST00000640408 STYXL1Q9Y6J8 313 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 KPNA4O00629 521 aaPredicted RBP5.91□□□□□ -1.46
RTTN-218ENST00000640408 CBFA2T3O75081 653 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 KRT38O76015 456 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 ACADSBP45954 432 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 FMO5P49326 533 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 CACNA2D1P54289 1103 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 YWHAHQ04917 246 aaPredicted RBP5.91□□□□□ -1.46
RTTN-218ENST00000640408 DCTN2Q13561 401 aaKnown RBP5.91□□□□□ -1.46
RTTN-218ENST00000640408 ARID5BQ14865 1188 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 OVOS1Q6IE37 1185 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 GDAP1Q8TB36 358 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 SPPL2BQ8TCT7 592 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 SLITRK1Q96PX8 696 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 PDZD7Q9H5P4 517 aa5.91□□□□□ -1.46
RTTN-218ENST00000640408 MRPL40Q9NQ50 206 aaKnown RBP5.91□□□□□ -1.46
RTTN-218ENST00000640408 TYW5A2RUC4 315 aaKnown RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 WNT7AO00755 349 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 ZBTB39O15060 712 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 RTN3O95197 1032 aaPredicted RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 HLA-DRAP01903 254 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 GLUD2P49448 558 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 DEFA1P59665 94 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 DEFA3P59666 94 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 AMPD2Q01433 879 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 PABPC1LQ4VXU2 614 aaKnown RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 ARHGAP15Q53QZ3 475 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 TCP11X2Q5H9J9 407 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 CYP4A22Q5TCH4 519 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 ANKRD40Q6AI12 368 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 SPATA2LQ8IUW3 424 aaPredicted RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 STKLD1Q8NE28 680 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 C2orf15Q8WU43 125 aaKnown RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 CDCA3Q99618 268 aaPredicted RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 CBWD1Q9BRT8 395 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 EPC1Q9H2F5 836 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 WDR35Q9P2L0 1181 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 UXTQ9UBK9 157 aaPredicted RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 CPSF3Q9UKF6 684 aaKnown RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 ATAD5Q96QE3 1844 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 PRRG1O14668 218 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 PMM2O15305 246 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 RHOBTB1O94844 696 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 SCNN1GP51170 649 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 SPARCL1Q14515 664 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 CTXN3Q4LDR2 81 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 SGO2Q562F6 1265 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 TTI2Q6NXR4 508 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 RSRC2Q7L4I2 434 aaKnown RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 ZNF677Q86XU0 584 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 SKA1Q96BD8 255 aa5.9□□□□□ -1.46
RTTN-218ENST00000640408 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 LIMA1Q9UHB6 759 aaKnown RBP5.9□□□□□ -1.46
RTTN-218ENST00000640408 KLRC4O43908 158 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 GJB5O95377 273 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 LRG1P02750 347 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 ATF2P15336 505 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 ARL1P40616 181 aaPredicted RBP5.9□□□□□ -1.47
RTTN-218ENST00000640408 NUP107P57740 925 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 ZBED6P86452 979 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 PAN2Q504Q3 1202 aaKnown RBP5.9□□□□□ -1.47
RTTN-218ENST00000640408 PPP2R2DQ66LE6 453 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 DAW1Q8N136 415 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 SIX6OS1Q8N1H7 587 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 TOP6BLQ8N6T0 577 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 HELQQ8TDG4 1101 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 DIS3LQ8TF46 1054 aaKnown RBP5.9□□□□□ -1.47
RTTN-218ENST00000640408 CNBD2Q96M20 576 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 FMO2Q99518 471 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 LSM14BQ9BX40 385 aaKnown RBP5.9□□□□□ -1.47
RTTN-218ENST00000640408 FAM96AQ9H5X1 160 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 ZWILCHQ9H900 591 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 TRPC7Q9HCX4 862 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 DZANK1Q9NVP4 752 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 GGA2Q9UJY4 613 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 CAPN11Q9UMQ6 739 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 ZNF236Q9UL36 1845 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 DOCK3Q8IZD9 2030 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 SMIM28A0A1B0GU29 152 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 ZNF839A8K0R7 811 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 CCDC188H7C350 402 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 PODXLO00592 558 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 DPYSL4O14531 572 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 ZNF197O14709 1029 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 SH3BP5O60239 455 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 ATP6V1G1O75348 118 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 CCDC166P0CW27 439 aa5.9□□□□□ -1.47
RTTN-218ENST00000640408 CXCL8P10145 99 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms