RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CDC20Q12834 499 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 OVGP1Q12889 678 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 DRP2Q13474 957 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 MTF1Q14872 753 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 OCLNQ16625 522 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 SLFNL1Q499Z3 407 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 CRYBG3Q68DQ2 2970 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 TTBK2Q6IQ55 1244 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 DSG4Q86SJ6 1040 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 RETREG3Q86VR2 466 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 IQCHQ86VS3 1027 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 DDX42Q86XP3 938 aaKnown RBP eCLIP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 IL31RAQ8NI17 732 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 MAPK15Q8TD08 544 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 TRAPPC12Q8WVT3 735 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 TBC1D5Q92609 795 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ATXN7L3BQ96GX2 97 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 B3GALT6Q96L58 329 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 TTC14Q96N46 770 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ARMT1Q9H993 441 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 SENP2Q9HC62 589 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 MRS2Q9HD23 443 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 TDP1Q9NUW8 608 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 KLHL42Q9P2K6 505 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 MAGEC2Q9UBF1 373 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 SLC9A2Q9UBY0 812 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ADAM21Q9UKJ8 722 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 NOP58Q9Y2X3 529 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 RFPL1O75677 317 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 KAT7O95251 611 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 VTNP04004 478 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 PDHBP11177 359 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 WT1P19544 449 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 DNAJA1P31689 397 aaKnown RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 CCKBRP32239 447 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 SLC16A2P36021 539 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 FANCCQ00597 558 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 BFSP1Q12934 665 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 ZNF77Q15935 545 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 ZSCAN25Q6NSZ9 544 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 ADAT2Q7Z6V5 191 aaKnown RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 DUSP23Q9BVJ7 150 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 GPR174Q9BXC1 333 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 PLA2G12AQ9BZM1 189 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 ABCG4Q9H172 646 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 FBRSQ9HAH7 460 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 SPHK2Q9NRA0 654 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 PA2G4Q9UQ80 394 aaKnown RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 AKT3Q9Y243 479 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 YIPF1Q9Y548 306 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 PCDHGA9Q9Y5G4 932 aaKnown RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 SLC4A4Q9Y6R1 1079 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 FRMD3A2A2Y4 597 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 FAM181BA6NEQ2 426 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 SLC9A3R1O14745 358 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 PPP6R2O75170 966 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 HTR1EP28566 365 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 UGT1A5P35504 534 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 AVPR1AP37288 418 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 RABIFP47224 123 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 QARSP47897 775 aaKnown RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 IST1P53990 364 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 BCAT1P54687 386 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 TFAP4Q01664 338 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 FAM160A1Q05DH4 1040 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 DOC2BQ14184 412 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 TCEAL1Q15170 157 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 RNF187Q5TA31 235 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 SRGAP1Q7Z6B7 1085 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 FBXO39Q8N4B4 442 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 MRGPRX2Q96LB1 330 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 MRGPRX1Q96LB2 322 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 BARD1Q99728 777 aaKnown RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 ATXN3LQ9H3M9 355 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 ECHDC1Q9NTX5 307 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 TNFRSF10DQ9UBN6 386 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 CROTQ9UKG9 612 aa3.81□□□□□ -1.8
CCDC7-213ENST00000639290 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-213ENST00000639290 DPM1O60762 260 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 SEC24AO95486 1093 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 HSD3B2P26439 372 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 HOXA13P31271 388 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 ADD2P35612 726 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 FOXM1Q08050 763 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 ARID5BQ14865 1188 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 HMBOX1Q6NT76 420 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 GATAD2AQ86YP4 633 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 APLFQ8IW19 511 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 UBR7Q8N806 425 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 PLPP7Q8NBV4 271 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 PNPLA2Q96AD5 504 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 DBNDD2Q9BQY9 259 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 RBCK1Q9BYM8 510 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 OSBPL2Q9H1P3 480 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 ACBD3Q9H3P7 528 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 NLGN3Q9NZ94 848 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 SUCOQ9UBS9 1254 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms