RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 CEP57Q86XR8 500 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 ANKLE1Q8NAG6 615 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 CCDC114Q96M63 670 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 TBCBQ99426 244 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 COLEC11Q9BWP8 271 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 CALN1Q9BXU9 219 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 UBXN6Q9BZV1 441 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 NEUROG2Q9H2A3 272 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 DMAP1Q9NPF5 467 aaPredicted RBP22.68■■□□□ 1.22
SCARB2-212ENST00000638663 GPATCH2LQ9NWQ4 482 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 SNX24Q9Y343 169 aa22.68■■□□□ 1.22
SCARB2-212ENST00000638663 USP17L7P0C7H9 530 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 PBX3P40426 434 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 DYNLT1P63172 113 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 TAZQ16635 292 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 BOLA3Q53S33 107 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 DCAF6Q58WW2 860 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 FAM171A1Q5VUB5 890 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 SPATA2LQ8IUW3 424 aaPredicted RBP22.67■■□□□ 1.22
SCARB2-212ENST00000638663 EIF1ADQ8N9N8 165 aaKnown RBP22.67■■□□□ 1.22
SCARB2-212ENST00000638663 CAVIN3Q969G5 261 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 HAUS1Q96CS2 278 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 NCAPGQ9BPX3 1015 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 GPR62Q9BZJ7 368 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 CNGB3Q9NQW8 809 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 MARCH5Q9NX47 278 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 NT5C1B-RDH14C9J2C7 533 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 SYN3O14994 580 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 SULT1E1P49888 294 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 DAOAP59103 153 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 IKBKEQ14164 716 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 PPP1R7Q15435 360 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 PKN2Q16513 984 aaKnown RBP22.67■■□□□ 1.22
SCARB2-212ENST00000638663 SLC39A12Q504Y0 691 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 VARS2Q5ST30 1063 aaKnown RBP22.67■■□□□ 1.22
SCARB2-212ENST00000638663 CNKSR3Q6P9H4 555 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 ATL2Q8NHH9 583 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 SLCO2A1Q92959 643 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 ZBTB9Q96C00 473 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 VWCEQ96DN2 955 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 EFR3BQ9Y2G0 817 aa22.67■■□□□ 1.22
SCARB2-212ENST00000638663 CST8O60676 142 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 KRT17Q04695 432 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 MMRN1Q13201 1228 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 ZC3H12AQ5D1E8 599 aaKnown RBP22.66■■□□□ 1.22
SCARB2-212ENST00000638663 C4orf50Q6ZRC1 276 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 RFX6Q8HWS3 928 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 GRK7Q8WTQ7 553 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 TEKT4Q8WW24 435 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 B3GALT6Q96L58 329 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 SNRNP25Q9BV90 132 aaKnown RBP22.66■■□□□ 1.22
SCARB2-212ENST00000638663 ZCWPW1Q9H0M4 648 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 CALCOCO1Q9P1Z2 691 aa22.66■■□□□ 1.22
SCARB2-212ENST00000638663 MICAL3Q7RTP6 2002 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 YJEFN3A6XGL0 299 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 E7ENQ6 273 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 ZBED1O96006 694 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 GALTP07902 379 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 ARSEP51690 589 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 PITX1P78337 314 aaPredicted RBP22.65■■□□□ 1.22
SCARB2-212ENST00000638663 KRT81Q14533 505 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 SLC25A52Q3SY17 297 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 SYPL2Q5VXT5 272 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 LRRC43Q8N309 656 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.65■■□□□ 1.22
SCARB2-212ENST00000638663 SLC2A13Q96QE2 648 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 POPDC2Q9HBU9 364 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 FAM53CQ9NYF3 392 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 DNPEPQ9ULA0 475 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 LIASO43766 372 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 ENDOD1O94919 500 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 CYP2F1P24903 491 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 NOS2P35228 1153 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 RPL21P46778 160 aaKnown RBP22.65■■□□□ 1.22
SCARB2-212ENST00000638663 NNTQ13423 1086 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 DPYSL3Q14195 570 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 CA9Q16790 459 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 BBS12Q6ZW61 710 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 DCP1BQ8IZD4 617 aaKnown RBP22.65■■□□□ 1.22
SCARB2-212ENST00000638663 TMEM175Q9BSA9 504 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 OGFRQ9NZT2 677 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 FEZ2Q9UHY8 353 aaPredicted RBP22.65■■□□□ 1.22
SCARB2-212ENST00000638663 NAALADL1Q9UQQ1 740 aa22.65■■□□□ 1.22
SCARB2-212ENST00000638663 KIAA0100Q14667 2235 aaKnown RBP22.64■■□□□ 1.22
SCARB2-212ENST00000638663 NLRC5Q86WI3 1866 aa22.64■■□□□ 1.22
SCARB2-212ENST00000638663 DRG2P55039 364 aaKnown RBP22.64■■□□□ 1.21
SCARB2-212ENST00000638663 CTXN3Q4LDR2 81 aa22.64■■□□□ 1.21
SCARB2-212ENST00000638663 FUT10Q6P4F1 479 aa22.64■■□□□ 1.21
SCARB2-212ENST00000638663 STRADAQ7RTN6 431 aa22.64■■□□□ 1.21
SCARB2-212ENST00000638663 TMEM173Q86WV6 379 aaPredicted RBP22.64■■□□□ 1.21
SCARB2-212ENST00000638663 PRDM5Q9NQX1 630 aaPredicted RBP22.64■■□□□ 1.21
SCARB2-212ENST00000638663 ABI2Q9NYB9 513 aaPredicted RBP22.64■■□□□ 1.21
SCARB2-212ENST00000638663 SAE1Q9UBE0 346 aaPredicted RBP22.64■■□□□ 1.21
SCARB2-212ENST00000638663 HPCAL4Q9UM19 191 aa22.64■■□□□ 1.21
SCARB2-212ENST00000638663 SF3B1O75533 1304 aaKnown RBP eCLIP22.64■■□□□ 1.214e-6■■■■■ 139.6
SCARB2-212ENST00000638663 FNDC1Q4ZHG4 1894 aaPredicted RBP22.64■■□□□ 1.21
SCARB2-212ENST00000638663 SYNJ2BP-COX16A0A087WUM0 186 aa22.63■■□□□ 1.21
SCARB2-212ENST00000638663 VWA8A3KMH1 1905 aa22.63■■□□□ 1.21
SCARB2-212ENST00000638663 MDM4O15151 490 aa22.63■■□□□ 1.21
SCARB2-212ENST00000638663 GAS8O95995 478 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms