RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 UBN1Q9NPG3 1134 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 SAMD15Q9P1V8 674 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 CLUHO75153 1309 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 PDCD11Q14690 1871 aaKnown RBP22.43■■□□□ 1.18
CLN6-224ENST00000638076 SMAPO00193 183 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 APOL1O14791 398 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 MDM4O15151 490 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 SV2CQ496J9 727 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 TRABD2AQ86V40 505 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 NME8Q8N427 588 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 PCDH19Q8TAB3 1148 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 MRRFQ96E11 262 aaKnown RBP22.42■■□□□ 1.18
CLN6-224ENST00000638076 ELAC2Q9BQ52 826 aaKnown RBP22.42■■□□□ 1.18
CLN6-224ENST00000638076 NSRP1Q9H0G5 558 aaKnown RBP22.42■■□□□ 1.18
CLN6-224ENST00000638076 NKIRAS1Q9NYS0 192 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 HEY1Q9Y5J3 304 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 CENPFP49454 3210 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 DCAF8L1A6NGE4 600 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 E7ESA3 106 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 SSTR1P30872 391 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 PURAQ00577 322 aaKnown RBP22.42■■□□□ 1.18
CLN6-224ENST00000638076 NR1H3Q13133 447 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 PPP6R3Q5H9R7 873 aaPredicted RBP22.42■■□□□ 1.18
CLN6-224ENST00000638076 TWF2Q6IBS0 349 aaKnown RBP22.42■■□□□ 1.18
CLN6-224ENST00000638076 C17orf99Q6UX52 265 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 ARHGEF18Q6ZSZ5 1173 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 SLC26A9Q7LBE3 791 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 ADGRF2Q8IZF7 708 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 FBXO36Q8NEA4 188 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 TSPAN18Q96SJ8 248 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 WDR83Q9BRX9 315 aaKnown RBP22.42■■□□□ 1.18
CLN6-224ENST00000638076 ADAM33Q9BZ11 813 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 OSBPL7Q9BZF2 842 aa22.42■■□□□ 1.18
CLN6-224ENST00000638076 MANSC4A6NHS7 340 aaPredicted RBP22.41■■□□□ 1.18
CLN6-224ENST00000638076 TCP11X1B4DZS4 312 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 HUS1O60921 280 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 GNAT1P11488 350 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 TGM2P21980 687 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 PTPN9P43378 593 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 ATXN1P54253 815 aaKnown RBP22.41■■□□□ 1.18
CLN6-224ENST00000638076 BCAR1P56945 870 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 LILRA4P59901 499 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 FAM182AQ5T1J6 154 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 PDIK1LQ8N165 341 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 ANKS4BQ8N8V4 417 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 ATP11CQ8NB49 1132 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 CKAP2Q8WWK9 683 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 APBA2Q99767 749 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 NCAPGQ9BPX3 1015 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 ZMYND8Q9ULU4 1186 aaPredicted RBP22.41■■□□□ 1.18
CLN6-224ENST00000638076 GOLGA6L7A0A1B0GV03 622 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 STX2P32856 288 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 PHBP35232 272 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 RPL34P49207 117 aaKnown RBP22.41■■□□□ 1.18
CLN6-224ENST00000638076 PKN2Q16513 984 aaKnown RBP22.41■■□□□ 1.18
CLN6-224ENST00000638076 BBS9Q3SYG4 887 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 SLC9A4Q6AI14 798 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 LIMS2Q7Z4I7 341 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 C11orf84Q9BUA3 381 aaPredicted RBP22.41■■□□□ 1.18
CLN6-224ENST00000638076 USP29Q9HBJ7 922 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 RABGEF1Q9UJ41 708 aa22.41■■□□□ 1.18
CLN6-224ENST00000638076 MAP3K6O95382 1288 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 KRT15P19012 456 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 HOXC8P31273 242 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 C3orf62Q6ZUJ4 267 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 FAM228AQ86W67 206 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 ZNF670Q9BS34 389 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 PPCSQ9HAB8 311 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 SLC24A2Q9UI40 661 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.4■■□□□ 1.18
CLN6-224ENST00000638076 KCNN4O15554 427 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 RNASELQ05823 741 aaKnown RBP22.4■■□□□ 1.18
CLN6-224ENST00000638076 EFHC2Q5JST6 749 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 SYCP2LQ5T4T6 812 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 OSTM1Q86WC4 334 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 VSIG1Q86XK7 387 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 PALM2Q8IXS6 379 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 TNIP3Q96KP6 325 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 CYLDQ9NQC7 956 aa22.4■■□□□ 1.18
CLN6-224ENST00000638076 PSMC3IPQ9P2W1 217 aaPredicted RBP22.4■■□□□ 1.18
CLN6-224ENST00000638076 FAM47DPA6NHR8 397 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 FSBPO95073 299 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 TKTP29401 623 aaKnown RBP22.39■■□□□ 1.17
CLN6-224ENST00000638076 SCNN1AP37088 669 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 ACADSBP45954 432 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 GEMIN4P57678 1058 aaKnown RBP22.39■■□□□ 1.17
CLN6-224ENST00000638076 PPP1R21Q6ZMI0 780 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 CENPIQ92674 756 aaPredicted RBP22.39■■□□□ 1.17
CLN6-224ENST00000638076 FAF2Q96CS3 445 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 DNAI2Q9GZS0 605 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 TRABDQ9H4I3 376 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 KIF9Q9HAQ2 790 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 FGFR1OP2Q9NVK5 253 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 CAPN7Q9Y6W3 813 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 DNAH12Q6ZR08 3092 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 MYADML2A6NDP7 307 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 PTGESO14684 152 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 TNPO2O14787 897 aaKnown RBP22.39■■□□□ 1.17
CLN6-224ENST00000638076 SPAG7O75391 227 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 CPP00450 1065 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms