RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 HIST1H2ABP04908 130 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 CNPP09543 421 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 FAM200BP0CF97 657 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 EFNA5P52803 228 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 HIST3H2AQ7L7L0 130 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 HIST1H2ACQ93077 130 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 RELTQ969Z4 430 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 TUT1Q9H6E5 874 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 LY9Q9HBG7 655 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 STARD7Q9NQZ5 370 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 EPS8Q12929 822 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 FOXP3Q9BZS1 431 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 PSMD14O00487 310 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 PDGFRAP16234 1089 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 PLA2G4FQ68DD2 849 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 DHX40Q8IX18 779 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 C18orf25Q96B23 403 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 CD248Q9HCU0 757 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 MSRAQ9UJ68 235 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 PSMD11O00231 422 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 CD4P01730 458 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 VTNP04004 478 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 HALP42357 657 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 IL2P60568 153 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 RBP5P82980 135 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 CDC42EP1Q00587 391 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 FAM171BQ6P995 826 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 GPRC5AQ8NFJ5 357 aa16.84■□□□□ 0.29
CACNA1A-258ENST00000638029 GRID2IPA4D2P6 1211 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 MSH3P20585 1137 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 FCHO2Q0JRZ9 810 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 NECAB2Q7Z6G3 386 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 EXOC2Q96KP1 924 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 CAMKK2Q96RR4 588 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 SMARCAL1Q9NZC9 954 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 LYVE1Q9Y5Y7 322 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 CBX4O00257 560 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 TRIQKQ629K1 86 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 CLEC4MQ9H2X3 399 aaPredicted RBP16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 HERC5Q9UII4 1024 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 USP6P35125 1406 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 ANXA11P50995 505 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 AMACRQ9UHK6 382 aa16.83■□□□□ 0.29
CACNA1A-258ENST00000638029 EIF2S3P41091 472 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 CCNG1P51959 295 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 NPEPPSP55786 919 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 ARID5BQ14865 1188 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 NDUFAF6Q330K2 333 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 SH3D21A4FU49 640 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 CHI3L2Q15782 390 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 MTHFD1LQ6UB35 978 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 MEI4A8MW99 385 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 STX7O15400 261 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 TRIP10Q15642 601 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 ZCCHC8Q6NZY4 707 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 CDK20Q8IZL9 346 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 GAL3ST3Q96A11 431 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 TMEM117Q9H0C3 514 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 GPSM3Q9Y4H4 160 aa16.83■□□□□ 0.28
CACNA1A-258ENST00000638029 PFASO15067 1338 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 TBKBP1A7MCY6 615 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 NR5A2O00482 541 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 CTCFP49711 727 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 SERPINH1P50454 418 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 OTUD4Q01804 1114 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 EFEMP1Q12805 493 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 NCOA4Q13772 614 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 TBC1D25Q3MII6 688 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 C3orf62Q6ZUJ4 267 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 ATG16L2Q8NAA4 619 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 NMD3Q96D46 503 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 METTL5Q9NRN9 209 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 CHORDC1Q9UHD1 332 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 CEP152O94986 1710 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 USP11P51784 963 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 RABL6Q3YEC7 729 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 DCP1BQ8IZD4 617 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 ATP6V0D2Q8N8Y2 350 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 MRPL48Q96GC5 212 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 LARGE1O95461 756 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 HSPA9P38646 679 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 BBS4Q96RK4 519 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 TNKS2Q9H2K2 1166 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 ADGRL2O95490 1459 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 PLEKHG2Q9H7P9 1386 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 H7C4K7 107 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 EDRF1Q3B7T1 1238 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 NOTUMQ6P988 496 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 CYP4Z1Q86W10 505 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 ATG7O95352 703 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 IL6P05231 212 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 TGM3Q08188 693 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 ORC2Q13416 577 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 FRMD5Q7Z6J6 570 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 RCOR2Q8IZ40 523 aa16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 CCT3P49368 545 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-258ENST00000638029 GRM4Q14833 912 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms