RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 FIBCD1Q8N539 461 aa16.06■□□□□ 0.16
CLN6-219ENST00000637329 MAFAQ8NHW3 353 aaPredicted RBP16.06■□□□□ 0.16
CLN6-219ENST00000637329 TEKT4Q8WW24 435 aa16.06■□□□□ 0.16
CLN6-219ENST00000637329 CENPIQ92674 756 aaPredicted RBP16.06■□□□□ 0.16
CLN6-219ENST00000637329 CLP1Q92989 425 aaKnown RBP16.06■□□□□ 0.16
CLN6-219ENST00000637329 FAM149B1Q96BN6 582 aa16.06■□□□□ 0.16
CLN6-219ENST00000637329 FAM122AQ96E09 287 aa16.06■□□□□ 0.16
CLN6-219ENST00000637329 CFAP57Q96MR6 1250 aa16.06■□□□□ 0.16
CLN6-219ENST00000637329 LBHD1Q9BQE6 289 aaPredicted RBP16.06■□□□□ 0.16
CLN6-219ENST00000637329 TMEM51Q9NW97 253 aa16.06■□□□□ 0.16
CLN6-219ENST00000637329 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
CLN6-219ENST00000637329 PCDHB12Q9Y5F1 795 aa16.06■□□□□ 0.16
CLN6-219ENST00000637329 PLXNA3P51805 1871 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 KRIT1O00522 736 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 TNFRSF10BO14763 440 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 PRPSAP2O60256 369 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 GRAP2O75791 330 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 ZRANB2O95218 330 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLN6-219ENST00000637329 LTFP02788 710 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 KRT1P04264 644 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 URODP06132 367 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 TUBBP07437 444 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 GRIK1P39086 918 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 SLC5A3P53794 718 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 C2orf54Q08AI8 447 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 TAF5Q15542 800 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 ELF2Q15723 593 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 SLC25A52Q3SY17 297 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 GLE1Q53GS7 698 aaKnown RBP16.05■□□□□ 0.16
CLN6-219ENST00000637329 KIAA1841Q6NSI8 718 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 TMCO2Q7Z6W1 182 aaPredicted RBP16.05■□□□□ 0.16
CLN6-219ENST00000637329 VSIG1Q86XK7 387 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 RCOR2Q8IZ40 523 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 ARFGAP1Q8N6T3 406 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 NOA1Q8NC60 698 aaKnown RBP16.05■□□□□ 0.16
CLN6-219ENST00000637329 FBXO22Q8NEZ5 403 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 FAM172AQ8WUF8 416 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 RIN2Q8WYP3 895 aaPredicted RBP16.05■□□□□ 0.16
CLN6-219ENST00000637329 NT5C3BQ969T7 300 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 SPATA17Q96L03 361 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 B3GALT6Q96L58 329 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 RAD9AQ99638 391 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 SLITRK6Q9H5Y7 841 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLN6-219ENST00000637329 RBM12Q9NTZ6 932 aaKnown RBP16.05■□□□□ 0.16
CLN6-219ENST00000637329 COMMD8Q9NX08 183 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 SMARCAL1Q9NZC9 954 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 MTUS1Q9ULD2 1270 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 USP18Q9UMW8 372 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 RWDD3Q9Y3V2 267 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
CLN6-219ENST00000637329 TARSL2A2RTX5 802 aaKnown RBP16.04■□□□□ 0.16
CLN6-219ENST00000637329 FSCN2O14926 492 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 MDM4O15151 490 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 TCF4P15884 667 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 CYP2F1P24903 491 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 MIPP30301 263 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 GJC1P36383 396 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 EPHB4P54760 987 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 RPL10AP62906 217 aaKnown RBP16.04■□□□□ 0.16
CLN6-219ENST00000637329 SMC1AQ14683 1233 aaKnown RBP16.04■□□□□ 0.16
CLN6-219ENST00000637329 ERCC6LQ2NKX8 1250 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 ODF2Q5BJF6 829 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 DAB2IPQ5VWQ8 1189 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 TPGS2Q68CL5 300 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 BHLHA9Q7RTU4 235 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 TAS1R1Q7RTX1 841 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 BNIPLQ7Z465 357 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 SLC13A5Q86YT5 568 aaPredicted RBP16.04■□□□□ 0.16
CLN6-219ENST00000637329 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 RUNDC3BQ96NL0 473 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 SLITRK1Q96PX8 696 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 ZBED2Q9BTP6 218 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 FBXO44Q9H4M3 255 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 NGRNQ9NPE2 291 aaKnown RBP16.04■□□□□ 0.16
CLN6-219ENST00000637329 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
CLN6-219ENST00000637329 MAFFQ9ULX9 164 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 SSX2IPQ9Y2D8 614 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 EFR3BQ9Y2G0 817 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 CDY1Q9Y6F8 540 aa16.04■□□□□ 0.16
CLN6-219ENST00000637329 ZNF487B1APH4 448 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 ENDOD1O94919 500 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 RTN3O95197 1032 aaPredicted RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 TRUB2O95900 331 aaKnown RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 LINC00271P0C7V0 271 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 NDUFV1P49821 464 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 SULT1E1P49888 294 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 AIF1P55008 147 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 HDAC4P56524 1084 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 ROR1Q01973 937 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 KRT17Q04695 432 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 C15orf59Q2T9L4 293 aaPredicted RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 BOLA3Q53S33 107 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 RASIP1Q5U651 963 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 C8orf74Q6P047 294 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 PRSS55Q6UWB4 352 aaPredicted RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 CYP4V2Q6ZWL3 525 aaPredicted RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 PSTKQ8IV42 348 aaKnown RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 CCDC50Q8IVM0 306 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 SCN4BQ8IWT1 228 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms