RNA–Protein interactions for RNA: ENST00000636436.1

SYNGAP1-214, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-214ENST00000636436 UBL7Q96S82 380 aaPredicted RBP3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 DUSP9Q99956 384 aaKnown RBP3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 BBS2Q9BXC9 721 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 TMEM121BQ9BXQ6 578 aaPredicted RBP3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 IMPG2Q9BZV3 1241 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 MIR1-1HGQ9H1L0 117 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 LINC00597Q9H2U6 94 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 FBXO44Q9H4M3 255 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 PRDM16Q9HAZ2 1276 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 CAPN10Q9HC96 672 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 DMAP1Q9NPF5 467 aaPredicted RBP3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 TLR8Q9NR97 1041 aaKnown RBP3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 SPHK2Q9NRA0 654 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 OLFML3Q9NRN5 406 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 TM7SF3Q9NS93 570 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 TMEM74BQ9NUR3 256 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 TMLHEQ9NVH6 421 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 INTS13Q9NVM9 706 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 COMMD8Q9NX08 183 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 GCNT4Q9P109 453 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 KIAA1522Q9P206 1035 aaPredicted RBP3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 SMC3Q9UQE7 1217 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 ZNF510Q9Y2H8 683 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 STARD13Q9Y3M8 1113 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 PCDHGB2Q9Y5G2 931 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 RALGAPA1Q6GYQ0 2036 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 DOCK6Q96HP0 2047 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 TSC2P49815 1807 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 LOC400499M0QZD8 3231 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 IGF2RP11717 2491 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 PKD1L2Q7Z442 2459 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 ZFYVE26Q68DK2 2539 aa3.18□□□□□ -1.9
SYNGAP1-214ENST00000636436 KALRNO60229 2985 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 GOLGA8IPA6NC78 632 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 GOLGA8JA6NMD2 632 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 GOLGA8CPA6NN73 597 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 TISP43B9A030 160 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 TK2O00142 265 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 EIF3DO15371 548 aaKnown RBP eCLIP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 COCHO43405 550 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 STX6O43752 255 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 CACNG3O60359 315 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 DFNA5O60443 496 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 TLR5O60602 858 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ADAM23O75077 832 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 TULP3O75386 442 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 TACC1O75410 805 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 AP1G2O75843 785 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 OLFM2O95897 454 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 DLATP10515 647 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 IRF1P10914 325 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 RALAP11233 206 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 NCAM1P13591 858 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 HLA-EP13747 358 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 CD59P13987 128 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 HOXB3P14651 431 aaPredicted RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 TYRP14679 529 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 PTPN1P18031 435 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 GABRG2P18507 467 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 NDUFV2P19404 249 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 LMO2P25791 158 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 GJB2P29033 226 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ADSSP30520 456 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ATP5C1P36542 298 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 WASP42768 502 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 SLC6A11P48066 632 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 PSEN1P49768 467 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 AP3M2P53677 418 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 SLC5A3P53794 718 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 C21orf59P57076 290 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 SLC8A3P57103 927 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 SNRPFP62306 86 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ORC1Q13415 861 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 BIRC3Q13489 604 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 EIF4HQ15056 248 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 RABEP1Q15276 862 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 SF3A1Q15459 793 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 IL17AQ16552 155 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ZNF699Q32M78 642 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 WDR72Q3MJ13 1102 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 TTC31Q49AM3 519 aaPredicted RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 C6orf118Q5T5N4 469 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 EMC10Q5UCC4 262 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 DCAF12L1Q5VU92 463 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 SNX30Q5VWJ9 437 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 RHBDF2Q6PJF5 856 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 CRELD2Q6UXH1 353 aaPredicted RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 CCNI2Q6ZMN8 369 aaPredicted RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ANKS1BQ7Z6G8 1248 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 GLRX5Q86SX6 157 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 METTL3Q86U44 580 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 CCDC117Q8IWD4 279 aaPredicted RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 BBS7Q8IWZ6 715 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 SCUBE3Q8IX30 993 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ETFBKMTQ8IXQ9 262 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 TMEM130Q8N3G9 435 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ZCCHC9Q8N567 271 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 DEFB119Q8N690 84 aa3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 PDCD7Q8N8D1 485 aaKnown RBP3.17□□□□□ -1.9
SYNGAP1-214ENST00000636436 ZNF557Q8N988 423 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms