RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 SERPINB4P48594 390 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 BCAR1P56945 870 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 YWHAZP63104 245 aaKnown RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 PRKD1Q15139 912 aaPredicted RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 CCDC6Q16204 474 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 CELF3Q5SZQ8 465 aaKnown RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 LGSNQ5TDP6 509 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 HPDLQ96IR7 371 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 SRPK1Q96SB4 655 aaKnown RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 MIPEPQ99797 713 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 CADM1Q9BY67 442 aaKnown RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 MIS12Q9H081 205 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 KLC2Q9H0B6 622 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 TLE6Q9H808 572 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 CYP3A43Q9HB55 503 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 NGRNQ9NPE2 291 aaKnown RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 FBXO6Q9NRD1 293 aaPredicted RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 GPATCH2LQ9NWQ4 482 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 C2orf71A6NGG8 1288 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 C2CD4BA6NLJ0 364 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 I3L4J1 428 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 TGDSO95455 350 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 SNRPAP09012 282 aaKnown RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 DHRS4L1P0CG22 281 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 MYL2P10916 166 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 RBL1P28749 1068 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 SESN3P58005 492 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 TNFAIP2Q03169 654 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 RFWD3Q6PCD5 774 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 ENDOVQ8N8Q3 282 aaKnown RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 TRIM6Q9C030 488 aaPredicted RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 DCLRE1BQ9H816 532 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 KCNK13Q9HB14 408 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 PRMT7Q9NVM4 692 aaPredicted RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 TSPAN16Q9UKR8 245 aa11.14□□□□□ -0.63
PSPC1-207ENST00000635251 RPL26L1Q9UNX3 145 aaKnown RBP11.14□□□□□ -0.63
PSPC1-207ENST00000635251 SSC5DA1L4H1 1573 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 LOC285556D6RIA3 1793 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 EIF4E1BA6NMX2 242 aaKnown RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 DNAJC6O75061 913 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 SKAP2O75563 359 aaPredicted RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 ENDOD1O94919 500 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 APRTP07741 180 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 DESP17661 470 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 PHKA2P46019 1235 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 PTDSS1P48651 473 aaKnown RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 RGS7P49802 495 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 NDST1P52848 882 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 PDK2Q15119 407 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 TSNAXIP1Q2TAA8 658 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 MAP1SQ66K74 1059 aaPredicted RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 TRNP1Q6NT89 227 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 C4orf50Q6ZRC1 276 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 APBB1IPQ7Z5R6 666 aaPredicted RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 PLD5Q8N7P1 536 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 SH3TC2Q8TF17 1288 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 COPS5Q92905 334 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 SKA1Q96BD8 255 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 PTCD3Q96EY7 689 aaKnown RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 PRR11Q96HE9 360 aaPredicted RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 OXNAD1Q96HP4 312 aaPredicted RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 FAXDC2Q96IV6 333 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 CPB2Q96IY4 423 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 PIWIL1Q96J94 861 aaKnown RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 FRMD8Q9BZ67 464 aaPredicted RBP11.13□□□□□ -0.63
PSPC1-207ENST00000635251 SLC13A1Q9BZW2 595 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 SMARCAD1Q9H4L7 1026 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 USP29Q9HBJ7 922 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 PNPLA8Q9NP80 782 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 ETNK2Q9NVF9 386 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 TTLL3Q9Y4R7 772 aa11.13□□□□□ -0.63
PSPC1-207ENST00000635251 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 FZD9O00144 591 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 GSC2O15499 205 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 HBP1O60381 514 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 NEBLO76041 1014 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 DLDP09622 509 aaKnown RBP11.12□□□□□ -0.63
PSPC1-207ENST00000635251 IQCF3P0C7M6 154 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 MCF2P10911 925 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 TGM2P21980 687 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 TMPRSS15P98073 1019 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 VGLL4Q14135 290 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 TMEM132DQ14C87 1099 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 MUM1Q2TAK8 710 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 KHDC1Q4VXA5 237 aaKnown RBP11.12□□□□□ -0.63
PSPC1-207ENST00000635251 CYP4V2Q6ZWL3 525 aaPredicted RBP11.12□□□□□ -0.63
PSPC1-207ENST00000635251 TRIM42Q8IWZ5 723 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 FBXO16Q8IX29 292 aaPredicted RBP11.12□□□□□ -0.63
PSPC1-207ENST00000635251 LMNTD2Q8IXW0 634 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.12□□□□□ -0.63
PSPC1-207ENST00000635251 TEX9Q8N6V9 391 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 SLC16A10Q8TF71 515 aa11.12□□□□□ -0.63
PSPC1-207ENST00000635251 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
PSPC1-207ENST00000635251 MAD1L1Q9Y6D9 718 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms