RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 EML3Q32P44 896 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 DGKKQ5KSL6 1271 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 CCDC183Q5T5S1 534 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 TXNDC11Q6PKC3 985 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 CCDC186Q7Z3E2 898 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 TTC30AQ86WT1 665 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 ARHGAP18Q8N392 663 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 TUBGCP2Q9BSJ2 902 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 ANO10Q9NW15 660 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 TBC1D14Q9P2M4 693 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 USP3Q9Y6I4 520 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 E2F8A0AVK6 867 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 GTPBP10A4D1E9 387 aaKnown RBP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 OTOL1A6NHN0 477 aaPredicted RBP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 KCNJ18B7U540 433 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 RNF225M0QZC1 329 aaPredicted RBP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 O00370 1275 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 SETSIPP0DME0 302 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 CHRNB1P11230 501 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 SLC9A1P19634 815 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 TKTL1P51854 596 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 FZD5Q13467 585 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 KCNJ12Q14500 433 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 CNGA2Q16280 664 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 C10orf120Q5SQS8 335 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 TRIM65Q6PJ69 517 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 LCLAT1Q6UWP7 414 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 RBM43Q6ZSC3 357 aaKnown RBP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 ENOX1Q8TC92 643 aaKnown RBP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 CDK5RAP1Q96SZ6 601 aaKnown RBP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 IER2Q9BTL4 223 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 NDST4Q9H3R1 872 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 CYLDQ9NQC7 956 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 NFE2L3Q9Y4A8 694 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 M0QYV0 167 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 TBX18O95935 607 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 TPM2P07951 284 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 IRF1P10914 325 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 BRD2P25440 801 aaKnown RBP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 GJA4P35212 333 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 USP8P40818 1118 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 PGFP49763 221 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 PPP2R5DQ14738 602 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 ARHGAP44Q17R89 818 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 RAB41Q5JT25 222 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 ZNF687Q8N1G0 1237 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 SIX6OS1Q8N1H7 587 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 TFAP2BQ92481 460 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 CHRDQ9H2X0 955 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 NMUR1Q9HB89 426 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 SAMSN1Q9NSI8 373 aaKnown RBP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC00339-207ENST00000634712 APEX2Q9UBZ4 518 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 DNMT3LQ9UJW3 386 aa16.51■□□□□ 0.23
LINC00339-207ENST00000634712 COL4A2P08572 1712 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 HELZP42694 1942 aaKnown RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 TRDMT1O14717 391 aaKnown RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 SCAMP3O14828 347 aaKnown RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 MED7O43513 233 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 ZBED1O96006 694 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 EEF1GP26641 437 aaKnown RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 PON1P27169 355 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 PLA2G4AP47712 749 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 GALK1P51570 392 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 CSTF1Q05048 431 aaKnown RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 MTAPQ13126 283 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 STX1AQ16623 288 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 RSRC2Q7L4I2 434 aaKnown RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 ADGRG2Q8IZP9 1017 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 SYNPOQ8N3V7 929 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 P2RY13Q9BPV8 354 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 RBM12Q9NTZ6 932 aaKnown RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 OSER1Q9NX31 292 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 CLIC5Q9NZA1 410 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 LSM7Q9UK45 103 aaKnown RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 NUDT5Q9UKK9 219 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 FBXO4Q9UKT5 387 aa16.5■□□□□ 0.23
LINC00339-207ENST00000634712 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 KIF26AQ9ULI4 1882 aaPredicted RBP16.5■□□□□ 0.23
LINC00339-207ENST00000634712 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 MYO16Q9Y6X6 1858 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 PATJQ8NI35 1801 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 TULP2O00295 520 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 SP9P0CG40 484 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 LCP1P13796 627 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 DRD1P21728 446 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 YWHAGP61981 247 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00339-207ENST00000634712 ADIGQ0VDE8 80 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 TCP11X2Q5H9J9 407 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 BTBD8Q5XKL5 378 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 GJB7Q6PEY0 223 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 KLHDC10Q6PID8 442 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 SCD5Q86SK9 330 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 KCTD13Q8WZ19 329 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 CD101Q93033 1021 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 SECISBP2LQ93073 1101 aaKnown RBP16.49■□□□□ 0.23
LINC00339-207ENST00000634712 OTUB2Q96DC9 234 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 ZFRQ96KR1 1074 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms