RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 PTPN21Q16825 1174 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 BMT2Q1RMZ1 405 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 ASPRV1Q53RT3 343 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 GPATCH4Q5T3I0 446 aaKnown RBP6.37□□□□□ -1.39
LINC00254-202ENST00000633813 TMTC3Q6ZXV5 915 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 GPRIN1Q7Z2K8 1008 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 SRBD1Q8N5C6 995 aaKnown RBP6.37□□□□□ -1.39
LINC00254-202ENST00000633813 REPS2Q8NFH8 660 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 FBXO18Q8NFZ0 1043 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 CASKIN2Q8WXE0 1202 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 PHKBQ93100 1093 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 C8orf76Q96K31 380 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 DCLRE1CQ96SD1 692 aaKnown RBP6.37□□□□□ -1.39
LINC00254-202ENST00000633813 SMAD5Q99717 465 aaKnown RBP6.37□□□□□ -1.39
LINC00254-202ENST00000633813 SLC26A6Q9BXS9 759 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 SLC13A1Q9BZW2 595 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 ZSCAN16Q9H4T2 348 aaPredicted RBP6.37□□□□□ -1.39
LINC00254-202ENST00000633813 EIF2B4Q9UI10 523 aaKnown RBP6.37□□□□□ -1.39
LINC00254-202ENST00000633813 MAD2L2Q9UI95 211 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 ZNF112Q9UJU3 913 aa6.37□□□□□ -1.39
LINC00254-202ENST00000633813 SCAF8Q9UPN6 1271 aaKnown RBP6.37□□□□□ -1.39
LINC00254-202ENST00000633813 VPS37CA5D8V6 355 aaPredicted RBP6.36□□□□□ -1.39
LINC00254-202ENST00000633813 F5H6K3 240 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 PLEKHA8P1O95397 391 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 RAP2AP10114 183 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 XBP1P17861 261 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 WASP42768 502 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 GDF5P43026 501 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 CLRN1P58418 232 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 IGBP1P78318 339 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 KLRC3Q07444 240 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 ZNF543Q08ER8 600 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 TRIM29Q14134 588 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 ANKS6Q68DC2 871 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 GMCL1P1Q8NEA9 526 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 NRG4Q8WWG1 115 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 NDC1Q9BTX1 674 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 SPZ1Q9BXG8 430 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 ASPSCR1Q9BZE9 553 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 TAF1DQ9H5J8 278 aaPredicted RBP6.36□□□□□ -1.39
LINC00254-202ENST00000633813 SH2D4AQ9H788 454 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 INTUQ9ULD6 942 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 SORCS3Q9UPU3 1222 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 TMX2Q9Y320 296 aa6.36□□□□□ -1.39
LINC00254-202ENST00000633813 A0A1W2PRG0 241 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 CXorf49A8MYA2 514 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 DIRC3C9JPN6 131 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 SCAF4O95104 1147 aaKnown RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 BAG4O95429 457 aaKnown RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 VEGFAP15692 232 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 ALOX15P16050 662 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 PTMSP20962 102 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 PTGS2P35354 604 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 SLC1A4P43007 532 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 PCBP2Q15366 365 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 PFKFB3Q16875 520 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 SHROOM1Q2M3G4 852 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 BRDTQ58F21 947 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 ATXN7L2Q5T6C5 722 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 ATL3Q6DD88 541 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 DRC7Q8IY82 874 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 OR10H5Q8NGA6 315 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 CCHCR1Q8TD31 782 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 HDAC10Q969S8 669 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 TEKT5Q96M29 485 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 AIFM3Q96NN9 605 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 RIOX1Q9H6W3 641 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 SH3GLB2Q9NR46 395 aa6.35□□□□□ -1.39
LINC00254-202ENST00000633813 AJAP1Q9UKB5 411 aaPredicted RBP6.35□□□□□ -1.39
LINC00254-202ENST00000633813 SIPA1L1O43166 1804 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 NPIPB8E9PQR5 432 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 hCG_1984214I3L0E3 225 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 CYTH3O43739 400 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 PCDHGA12O60330 932 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 FAM20BO75063 409 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 GPR32O75388 356 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 ZNF202O95125 648 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 NDUFB10O96000 172 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 MMP1P03956 469 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 GOLGA8HP0CJ92 632 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 SCG2P13521 617 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 C5AR1P21730 350 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 U2AF2P26368 475 aaKnown RBP eCLIP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 MCM7P33993 719 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 NF2P35240 595 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 DGCR2P98153 550 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 GUCY1B3Q02153 619 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 RESTQ13127 1097 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 SAFBQ15424 915 aaKnown RBP eCLIP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 AFMIDQ63HM1 303 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 OTUD7BQ6GQQ9 843 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 RHOT1Q8IXI2 618 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 SCYL3Q8IZE3 742 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 ZNF713Q8N859 430 aaPredicted RBP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 CPT1CQ8TCG5 803 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 ACER1Q8TDN7 264 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 ZNF483Q8TF39 744 aaPredicted RBP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 SLC25A43Q8WUT9 341 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms