RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 PDGFDQ9GZP0 370 aaPredicted RBP14.61□□□□□ -0.07
UBE3A-220ENST00000630424 DDX4Q9NQI0 724 aaKnown RBP14.61□□□□□ -0.07
UBE3A-220ENST00000630424 TFR2Q9UP52 801 aa14.61□□□□□ -0.07
UBE3A-220ENST00000630424 TRPV2Q9Y5S1 764 aa14.61□□□□□ -0.07
UBE3A-220ENST00000630424 TUFMP49411 452 aaKnown RBP14.6□□□□□ -0.07
UBE3A-220ENST00000630424 NDST1P52848 882 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 CCL23P55773 120 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 OTUD4Q01804 1114 aaKnown RBP14.6□□□□□ -0.07
UBE3A-220ENST00000630424 TRMT11Q7Z4G4 463 aaKnown RBP14.6□□□□□ -0.07
UBE3A-220ENST00000630424 USP38Q8NB14 1042 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 ZNF555Q8NEP9 628 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 LPCAT1Q8NF37 534 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 SKA1Q96BD8 255 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 KAZALD1Q96I82 304 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 CDK5RAP1Q96SZ6 601 aaKnown RBP14.6□□□□□ -0.07
UBE3A-220ENST00000630424 APPL1Q9UKG1 709 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 USP18Q9UMW8 372 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 DYRK1BQ9Y463 629 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 MYPNQ86TC9 1320 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 SDR42E2A6NKP2 422 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 OR1E1P30953 314 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 OAZ1P54368 228 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 HDAC4P56524 1084 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 UBE3AQ05086 875 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 CNTN1Q12860 1018 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 TFDP3Q5H9I0 405 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 LVRNQ6Q4G3 990 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 ZNF438Q7Z4V0 828 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 SNCAIPQ9Y6H5 919 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 IRF6O14896 467 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 PSTPIP1O43586 416 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 MSCO60682 206 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 PPP1R37O75864 691 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 PTPRAP18433 802 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 RAD23BP54727 409 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 PSMC6P62333 389 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 CHI3L2Q15782 390 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 LRRC36Q1X8D7 754 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 DTX3LQ8TDB6 740 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 KCNK16Q96T55 309 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 TSPAN16Q9UKR8 245 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 CPS1P31327 1500 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 TMEM150BA6NC51 233 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 AKAP3O75969 853 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 GLRBP48167 497 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 ADIGQ0VDE8 80 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 NOGQ13253 232 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 PTPAQ15257 358 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 NFIL3Q16649 462 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 CACHD1Q5VU97 1274 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 TADA1Q96BN2 335 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 TINF2Q9BSI4 451 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 SYTL2Q9HCH5 934 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 BARX2Q9UMQ3 279 aaPredicted RBP14.6□□□□□ -0.07
UBE3A-220ENST00000630424 PLAGL2Q9UPG8 496 aa14.6□□□□□ -0.07
UBE3A-220ENST00000630424 TMEM120BA0PK00 339 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 PLA2G6O60733 806 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 GUCA1AP43080 201 aaPredicted RBP14.59□□□□□ -0.07
UBE3A-220ENST00000630424 SEC23AQ15436 765 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 E2F4Q16254 413 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 ANKS6Q68DC2 871 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 HORMAD1Q86X24 394 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 TPCN2Q8NHX9 752 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 EME1Q96AY2 570 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 LRRC40Q9H9A6 602 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 EIF3LQ9Y262 564 aaKnown RBP14.59□□□□□ -0.07
UBE3A-220ENST00000630424 PLD1Q13393 1074 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 APOBEC3HQ6NTF7 200 aaKnown RBP14.59□□□□□ -0.07
UBE3A-220ENST00000630424 PPP1R13LQ8WUF5 828 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 EXOSC4Q9NPD3 245 aaKnown RBP14.59□□□□□ -0.07
UBE3A-220ENST00000630424 MRGBPQ9NV56 204 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 NFASCO94856 1347 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 GNG14A0A1W2PPG7 69 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 TBC1D3BA6NDS4 549 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 VGLL3A8MV65 326 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 ACKR2O00590 384 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 SLC39A12Q504Y0 691 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 PLEKHM3Q6ZWE6 761 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 DMAP1Q9NPF5 467 aaPredicted RBP14.59□□□□□ -0.07
UBE3A-220ENST00000630424 IARS2Q9NSE4 1012 aaKnown RBP14.59□□□□□ -0.07
UBE3A-220ENST00000630424 MAP10Q9P2G4 905 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 CCDC85CA6NKD9 419 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 HALP42357 657 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 PRAMEF19Q5SWL8 479 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 C16orf87Q6PH81 154 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 ARID3BQ8IVW6 561 aaPredicted RBP14.59□□□□□ -0.07
UBE3A-220ENST00000630424 IDI2Q9BXS1 227 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 UBE2OQ9C0C9 1292 aaKnown RBP14.59□□□□□ -0.07
UBE3A-220ENST00000630424 ASB7Q9H672 318 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 CYP4F12Q9HCS2 524 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 GPRC5DQ9NZD1 345 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 CROCC2H7BZ55 1655 aa14.59□□□□□ -0.07
UBE3A-220ENST00000630424 KLHL2O95198 593 aa14.58□□□□□ -0.07
UBE3A-220ENST00000630424 TRPC1P48995 793 aa14.58□□□□□ -0.07
UBE3A-220ENST00000630424 HNRNPH2P55795 449 aaKnown RBP14.58□□□□□ -0.07
UBE3A-220ENST00000630424 SLC29A2Q14542 456 aa14.58□□□□□ -0.07
UBE3A-220ENST00000630424 CNGA3Q16281 694 aa14.58□□□□□ -0.07
UBE3A-220ENST00000630424 CMTM5Q96DZ9 223 aa14.58□□□□□ -0.07
UBE3A-220ENST00000630424 THTPAQ9BU02 230 aa14.58□□□□□ -0.07
UBE3A-220ENST00000630424 INTS13Q9NVM9 706 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms