RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 TARDBPQ13148 414 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHD2-218ENST00000629346 RABEP1Q15276 862 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 CFAP221Q4G0U5 840 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 GRAMD4Q6IC98 578 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 DENND5BQ6ZUT9 1274 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 TMEM25Q86YD3 366 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 KIAA1958Q8N8K9 716 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 ENGASEQ8NFI3 743 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 SNX19Q92543 992 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 FGF11Q92914 225 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 ZNF560Q96MR9 790 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 TIPINQ9BVW5 301 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 UPF2Q9HAU5 1272 aaKnown RBP12.72□□□□□ -0.37
CHD2-218ENST00000629346 DNAJC17Q9NVM6 304 aaKnown RBP12.72□□□□□ -0.37
CHD2-218ENST00000629346 FTSJ1Q9UET6 329 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 STARD13Q9Y3M8 1113 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 C2CD2Q9Y426 696 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 NFE2L3Q9Y4A8 694 aa12.72□□□□□ -0.37
CHD2-218ENST00000629346 METTL12A8MUP2 240 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 TRIM66O15016 1216 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 BDNFP23560 247 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 ANXA13P27216 316 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 IFRD2Q12894 506 aaPredicted RBP12.71□□□□□ -0.37
CHD2-218ENST00000629346 KRT79Q5XKE5 535 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 SLC39A4Q6P5W5 647 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 BBS7Q8IWZ6 715 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 SPACA3Q8IXA5 215 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 CADM4Q8NFZ8 388 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 SNIP1Q8TAD8 396 aaKnown RBP12.71□□□□□ -0.37
CHD2-218ENST00000629346 SCFD1Q8WVM8 642 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 NAF1Q96HR8 494 aaKnown RBP12.71□□□□□ -0.37
CHD2-218ENST00000629346 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.37
CHD2-218ENST00000629346 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
CHD2-218ENST00000629346 SPATA17Q96L03 361 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 PLIN2Q99541 437 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 GABRG3Q99928 467 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 ASB7Q9H672 318 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.37
CHD2-218ENST00000629346 AGAP1Q9UPQ3 857 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 SLCO1B1Q9Y6L6 691 aa12.71□□□□□ -0.37
CHD2-218ENST00000629346 E2F8A0AVK6 867 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 TISP43B9A030 160 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 PRRT4C9JH25 899 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 ANKRD63C9JTQ0 380 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 H0YCG3 227 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 CBX4O00257 560 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 HOXC11O43248 304 aaPredicted RBP12.7□□□□□ -0.38
CHD2-218ENST00000629346 OLFM2O95897 454 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 OAS1P00973 400 aaKnown RBP12.7□□□□□ -0.38
CHD2-218ENST00000629346 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
CHD2-218ENST00000629346 IL12RB1P42701 662 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 MAGEA11P43364 429 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 NCKAP1LP55160 1127 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 PSMC1P62191 440 aaKnown RBP12.7□□□□□ -0.38
CHD2-218ENST00000629346 TTC38Q5R3I4 469 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 ARHGAP40Q5TG30 622 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 SCARA3Q6AZY7 606 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 ADALQ6DHV7 355 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 FAM124AQ86V42 546 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHD2-218ENST00000629346 CACUL1Q86Y37 369 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 TMEM86AQ8N2M4 240 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 C4orf32Q8N8J7 132 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 FBXO18Q8NFZ0 1043 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 TMEM176AQ96HP8 235 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 FOXP1Q9H334 677 aaPredicted RBP12.7□□□□□ -0.38
CHD2-218ENST00000629346 CPNE5Q9HCH3 593 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 ITM2CQ9NQX7 267 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 LARSQ9P2J5 1176 aaKnown RBP12.7□□□□□ -0.38
CHD2-218ENST00000629346 ANKRD6Q9Y2G4 727 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 SH3BP1Q9Y3L3 701 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 KNTC1P50748 2209 aa12.7□□□□□ -0.38
CHD2-218ENST00000629346 COL6A6A6NMZ7 2263 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 PTPN13Q12923 2485 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 H0Y8X5 98 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 K7ENM7 598 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 BRINP1O60477 761 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 ITGB3P05106 788 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 IRF1P10914 325 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 C6P13671 934 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 PNPLA4P41247 253 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 TPMTP51580 245 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 AFF3P51826 1226 aaKnown RBP12.69□□□□□ -0.38
CHD2-218ENST00000629346 TFAMQ00059 246 aaKnown RBP12.69□□□□□ -0.38
CHD2-218ENST00000629346 RHDQ02161 417 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 CYP27A1Q02318 531 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 TAF10Q12962 218 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 DNAJC3Q13217 504 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 RTP5Q14D33 572 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 FUT11Q495W5 492 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 HES3Q5TGS1 186 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 LAYNQ6UX15 382 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 PRICKLE2Q7Z3G6 844 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 ADGRF2Q8IZF7 708 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 IGSF22Q8N9C0 903 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms