RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 GJC1P36383 396 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 ALDH7A1P49419 539 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 RWDD2BP57060 319 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 ADIGQ0VDE8 80 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 ELAVL2Q12926 359 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 PPIGQ13427 754 aaKnown RBP eCLIP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 MRPL58Q14197 206 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 TAF5Q15542 800 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 MAPRE1Q15691 268 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 CTXN3Q4LDR2 81 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 SLC39A12Q504Y0 691 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 SPOUT1Q5T280 376 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 SEL1L2Q5TEA6 688 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF280DQ6N043 979 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 AADACL2Q6P093 401 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 C4orf50Q6ZRC1 276 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 C16orf59Q7L2K0 433 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF572Q7Z3I7 529 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 BPHLQ86WA6 291 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 SPATA2LQ8IUW3 424 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 RHOT1Q8IXI2 618 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 C7orf61Q8IZ16 206 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 DCP1BQ8IZD4 617 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 NIPA2Q8N8Q9 360 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 NOA1Q8NC60 698 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 SPATA4Q8NEY3 305 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 RXFP2Q8WXD0 754 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 KCTD13Q8WZ19 329 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 BADQ92934 168 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 RPGRIP1Q96KN7 1286 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 RNPC3Q96LT9 517 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 KCNK16Q96T55 309 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 RC3H2Q9HBD1 1191 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 LRRC4Q9HBW1 653 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 TMEM30AQ9NV96 361 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 PGRMC1O00264 195 aaKnown RBP10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 GDF9O60383 454 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 FGGP02679 453 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 PYGMP11217 842 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 PDGFRAP16234 1089 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 FLT3P36888 993 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 SCNN1AP37088 669 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 NDUFV1P49821 464 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 TKTL1P51854 596 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF143P52747 638 aaPredicted RBP10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 FPGSQ05932 587 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 ADCY1Q08828 1119 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 BTG3Q14201 252 aaPredicted RBP10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 ELF2Q15723 593 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 RTP2Q5QGT7 225 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 TRNP1Q6NT89 227 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF365Q70YC5 407 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 SLC26A9Q7LBE3 791 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 TAS1R1Q7RTX1 841 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 CMTR2Q8IYT2 770 aaKnown RBP10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 SIX6OS1Q8N1H7 587 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 ARFGAP1Q8N6T3 406 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 NDRG1Q92597 394 aaKnown RBP10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 FOXJ1Q92949 421 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 IGSF21Q96ID5 467 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 UBXN6Q9BZV1 441 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 CSNK1G1Q9HCP0 422 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 ASNSD1Q9NWL6 643 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 TTC7AQ9ULT0 858 aaPredicted RBP10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 VWA8A3KMH1 1905 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 ALPK3Q96L96 1907 aa10.41□□□□□ -0.74
SOX2-OT-244ENST00000627738 MKI67P46013 3256 aaKnown RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 OR6C75A6NL08 312 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 HHLA1C9JL84 531 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 H7C4K7 107 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 ST8SIA5O15466 376 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 LRCH4O75427 683 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 CYP2F1P24903 491 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 SDC4P31431 198 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 GRIK1P39086 918 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 EPHB4P54760 987 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 ARPP19P56211 112 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 MRPS5P82675 430 aaKnown RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 ITIH3Q06033 890 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 NFE2Q16621 373 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 LONRF2Q1L5Z9 754 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 C15orf59Q2T9L4 293 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 CCDC14Q49A88 953 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 ATP13A4Q4VNC1 1196 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 RAB41Q5JT25 222 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 EFHC1Q5JVL4 640 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 TXNRD3NBQ6F5E7 133 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 KCNT2Q6UVM3 1135 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 PRSS55Q6UWB4 352 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 KATNAL2Q8IYT4 538 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 MMGT1Q8N4V1 131 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 CFAP57Q96MR6 1250 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF558Q96NG5 402 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 YME1L1Q96TA2 773 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 CNPY3Q9BT09 278 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 TTPALQ9BTX7 342 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms