RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 PPP3CAQ08209 521 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 MESP2Q0VG99 397 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 CRY1Q16526 586 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 SCARA5Q6ZMJ2 495 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 CLEC20AQ6ZU45 233 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 C12orf40Q86WS4 652 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 ZC3H3Q8IXZ2 948 aaKnown RBP9.31□□□□□ -0.92
CPSF7-226ENST00000626926 C12orf29Q8N999 325 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 OLIG1Q8TAK6 271 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 SLC2A14Q8TDB8 520 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 TAS1R2Q8TE23 839 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 WHAMMQ8TF30 809 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 CCDC47Q96A33 483 aaKnown RBP9.31□□□□□ -0.92
CPSF7-226ENST00000626926 CHAMP1Q96JM3 812 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 TWNKQ96RR1 684 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 PNKPQ96T60 521 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 IMPG2Q9BZV3 1241 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 NIF3L1Q9GZT8 377 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 DUSP15Q9H1R2 295 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-226ENST00000626926 GOLPH3LQ9H4A5 285 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 FBXO44Q9H4M3 255 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 CCSER2Q9H7U1 834 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 APOBEC3GQ9HC16 384 aaKnown RBP9.31□□□□□ -0.92
CPSF7-226ENST00000626926 POLR3BQ9NW08 1133 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-226ENST00000626926 SMPD4Q9NXE4 827 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 MARK1Q9P0L2 795 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 GMIPQ9P107 970 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 SCML2Q9UQR0 700 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 PCDHA5Q9Y5H7 936 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 PI4KAP42356 2102 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 CEP192Q8TEP8 1941 aa9.31□□□□□ -0.92
CPSF7-226ENST00000626926 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-226ENST00000626926 TLR5O60602 858 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 KAT7O95251 611 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 ADRB1P08588 477 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 FAM200BP0CF97 657 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 CCDC192P0DO97 292 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 RPL13P26373 211 aaKnown RBP9.3□□□□□ -0.92
CPSF7-226ENST00000626926 PSMC2P35998 433 aaKnown RBP9.3□□□□□ -0.92
CPSF7-226ENST00000626926 MPLP40238 635 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 GRIA2P42262 883 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 TNFRSF4P43489 277 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 PGFP49763 221 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 LY6G5CQ5SRR4 150 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 PMS2CLQ68D20 193 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 SPOPLQ6IQ16 392 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 HTR3DQ70Z44 454 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 GPRIN1Q7Z2K8 1008 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 CCDC186Q7Z3E2 898 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 FAM186BQ8IYM0 893 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 TTC39CQ8N584 583 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 IL17RCQ8NAC3 791 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 TSTD1Q8NFU3 115 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 SPATA20Q8TB22 786 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 DDX1Q92499 740 aaKnown RBP9.3□□□□□ -0.92
CPSF7-226ENST00000626926 ELMO3Q96BJ8 720 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 NT5C1AQ9BXI3 368 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 ARRDC1-AS1Q9H2J1 176 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 TMEM8AQ9HCN3 771 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 TLR8Q9NR97 1041 aaKnown RBP9.3□□□□□ -0.92
CPSF7-226ENST00000626926 VPS45Q9NRW7 570 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 STARD13Q9Y3M8 1113 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 USP3Q9Y6I4 520 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 CACNA1EQ15878 2313 aa9.3□□□□□ -0.92
CPSF7-226ENST00000626926 CKAP5Q14008 2032 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 BCLAF3A2AJT9 711 aaKnown RBP9.29□□□□□ -0.92
CPSF7-226ENST00000626926 CACNG3O60359 315 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 GDF9O60383 454 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 ADAM23O75077 832 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 TULP3O75386 442 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 ZNF202O95125 648 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 APODP05090 189 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 TRIM49P0CI25 452 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 TRIM49CP0CI26 452 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 HNRNPLP14866 589 aaKnown RBP eCLIP9.29□□□□□ -0.92
CPSF7-226ENST00000626926 TRIM21P19474 475 aaKnown RBP9.29□□□□□ -0.92
CPSF7-226ENST00000626926 GCLMP48507 274 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 PSEN1P49768 467 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 KIF11P52732 1056 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 MAP3K7CLP57077 242 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 GAD2Q05329 585 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 IFRD2Q12894 506 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-226ENST00000626926 ELF2Q15723 593 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 PREPLQ4J6C6 727 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-226ENST00000626926 KRT39Q6A163 491 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 TMEM92Q6UXU6 159 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 Q6ZNB5 142 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 SFTPA1Q8IWL2 248 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 BBS7Q8IWZ6 715 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 TERB1Q8NA31 727 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 SPRYD3Q8NCJ5 442 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 MDGA1Q8NFP4 955 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 WBP2Q969T9 261 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 CYFIP2Q96F07 1278 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 MED10Q9BTT4 135 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 KLF16Q9BXK1 252 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-226ENST00000626926 CD248Q9HCU0 757 aa9.29□□□□□ -0.92
CPSF7-226ENST00000626926 ARHGEF4Q9NR80 690 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms