RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 SLC4A11Q8NBS3 891 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 RPLP0P6Q8NHW5 317 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 EZH1Q92800 747 aaPredicted RBP11.44□□□□□ -0.58
SSBP4-215ENST00000625926 TATDN2Q93075 761 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 SLC35C1Q96A29 364 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 ZFRQ96KR1 1074 aaKnown RBP11.44□□□□□ -0.58
SSBP4-215ENST00000625926 CEP63Q96MT8 703 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 DUSP9Q99956 384 aaKnown RBP11.44□□□□□ -0.58
SSBP4-215ENST00000625926 CHD6Q8TD26 2715 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 FAM186AA6NE01 2351 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 BICDL2A1A5D9 508 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 CYP26A1O43174 497 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 GADD45BO75293 160 aaPredicted RBP11.43□□□□□ -0.58
SSBP4-215ENST00000625926 TBX18O95935 607 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 CD44P16070 742 aaKnown RBP11.43□□□□□ -0.58
SSBP4-215ENST00000625926 EIF2DP41214 584 aaKnown RBP11.43□□□□□ -0.58
SSBP4-215ENST00000625926 PGFP49763 221 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 PSEN1P49768 467 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 KIF11P52732 1056 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 RAD23BP54727 409 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 SLC8A3P57103 927 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 YWHAEP62258 255 aaKnown RBP11.43□□□□□ -0.58
SSBP4-215ENST00000625926 GAD2Q05329 585 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 CUL2Q13617 745 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 MORC3Q14149 939 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 LPAL2Q16609 132 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 GAB4Q2WGN9 574 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 CCDC40Q4G0X9 1142 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 ARHGAP17Q68EM7 881 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 KLHL10Q6JEL2 608 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 CEP68Q76N32 757 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 ACDQ96AP0 544 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 PNKPQ96T60 521 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 ARID3AQ99856 593 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 UBXN6Q9BZV1 441 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 CYLDQ9NQC7 956 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 VPS13AQ96RL7 3174 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 COL4A2P08572 1712 aa11.43□□□□□ -0.58
SSBP4-215ENST00000625926 A0A0A0MRY4 1105 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 A0A1W2PQH9 124 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.42□□□□□ -0.58
SSBP4-215ENST00000625926 K7EQS6 105 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 RETP07949 1114 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 ADH5P11766 374 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 RARGP13631 454 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 BMP6P22004 513 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 HOXC13P31276 330 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 PLA2G4AP47712 749 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 SLC6A11P48066 632 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 PXNP49023 591 aaPredicted RBP11.42□□□□□ -0.58
SSBP4-215ENST00000625926 FMO5P49326 533 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 GOLGA8FQ08AF8 430 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 GOLGA8DPQ0D2H9 430 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 CETN1Q12798 172 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 SRSF5Q13243 272 aaKnown RBP11.42□□□□□ -0.58
SSBP4-215ENST00000625926 LY6G5CQ5SRR4 150 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 BTBD8Q5XKL5 378 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 TTI2Q6NXR4 508 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 KLHDC10Q6PID8 442 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 FOXR2Q6PJQ5 311 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 HTR3DQ70Z44 454 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 CCDC186Q7Z3E2 898 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 TADA2BQ86TJ2 420 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 BBS7Q8IWZ6 715 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 ANKRD52Q8NB46 1076 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 USP33Q8TEY7 942 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 NELFBQ8WX92 580 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 KLF16Q9BXK1 252 aaPredicted RBP11.42□□□□□ -0.58
SSBP4-215ENST00000625926 NMUR1Q9HB89 426 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
SSBP4-215ENST00000625926 OSER1Q9NX31 292 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 DNMT3LQ9UJW3 386 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 NAGPAQ9UK23 515 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 USP3Q9Y6I4 520 aa11.42□□□□□ -0.58
SSBP4-215ENST00000625926 DNAH14Q0VDD8 3507 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 BIN1O00499 593 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 PMM2O15305 246 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 RPP40O75818 363 aaKnown RBP11.41□□□□□ -0.58
SSBP4-215ENST00000625926 KAT7O95251 611 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 APBB3O95704 486 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 GNA14O95837 355 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 APODP05090 189 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 IRF1P10914 325 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 RALAP11233 206 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 TBXAS1P24557 533 aaPredicted RBP11.41□□□□□ -0.58
SSBP4-215ENST00000625926 GRIA2P42262 883 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 SEC13P55735 322 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 MRPS21P82921 87 aaKnown RBP11.41□□□□□ -0.58
SSBP4-215ENST00000625926 LRMPQ12912 555 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 DMC1Q14565 340 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 ANO4Q32M45 955 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 PREPLQ4J6C6 727 aaPredicted RBP11.41□□□□□ -0.58
SSBP4-215ENST00000625926 SGO2Q562F6 1265 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 C2orf27AQ580R0 203 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.41□□□□□ -0.58
SSBP4-215ENST00000625926 SCD5Q86SK9 330 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 PIGZQ86VD9 579 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 ARHGAP18Q8N392 663 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 ZNF276Q8N554 614 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms