RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 DIS3LQ8TF46 1054 aaKnown RBP18.41■□□□□ 0.54
PCF11-207ENST00000624931 ZNF333Q96JL9 665 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 DNALI1O14645 258 aaPredicted RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 PPEF2O14830 753 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 WDR4P57081 412 aaKnown RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 TMED2Q15363 201 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 GSTA5Q7RTV2 222 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 CPNE8Q86YQ8 564 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 ATG4AQ8WYN0 398 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 PRCCQ92733 491 aaPredicted RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 LPPQ93052 612 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 MYLK2Q9H1R3 596 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 DPP3Q9NY33 737 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 GPR182O15218 404 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 PQBP1O60828 265 aaKnown RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 EDF1O60869 148 aaKnown RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 SMNDC1O75940 238 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCF11-207ENST00000624931 RPLP2P05387 115 aaKnown RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 GNAZP19086 355 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 ACO1P21399 889 aaKnown RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 RRM1P23921 792 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 RAP1GAPP47736 663 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 MORF4L2Q15014 288 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 TRIP13Q15645 432 aaPredicted RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 SLC45A4Q5BKX6 768 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 LRRC38Q5VT99 294 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 CAPRIN2Q6IMN6 1127 aaKnown RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 FBXO46Q6PJ61 603 aaPredicted RBP18.4■□□□□ 0.54
PCF11-207ENST00000624931 ALKAL1Q6UXT8 129 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 PCGF5Q86SE9 256 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 LMNTD2Q8IXW0 634 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 ARMC2Q8NEN0 867 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 STK32AQ8WU08 396 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 IMPG2Q9BZV3 1241 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 TRABDQ9H4I3 376 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 MLXIPLQ9NP71 852 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 FAM105AQ9NUU6 356 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 CNTN3Q9P232 1028 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 TBK1Q9UHD2 729 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 C2CD2Q9Y426 696 aa18.4■□□□□ 0.54
PCF11-207ENST00000624931 TJP3O95049 919 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 ZWINTO95229 277 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 HSPA1AP0DMV8 641 aaKnown RBP18.39■□□□□ 0.53
PCF11-207ENST00000624931 HSPA1BP0DMV9 641 aaKnown RBP18.39■□□□□ 0.53
PCF11-207ENST00000624931 PAX7P23759 505 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 TAF11Q15544 211 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 CCDC142Q17RM4 750 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 FYB2Q5VWT5 728 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 MON1BQ7L1V2 547 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 NAF1Q96HR8 494 aaKnown RBP18.39■□□□□ 0.53
PCF11-207ENST00000624931 ZFP42Q96MM3 310 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 NXF1Q9UBU9 619 aaKnown RBP18.39■□□□□ 0.53
PCF11-207ENST00000624931 IP6K2Q9UHH9 426 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 LNPEPQ9UIQ6 1025 aa18.39■□□□□ 0.53
PCF11-207ENST00000624931 ALOX15BO15296 676 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 CD58P19256 250 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 PTPN7P35236 360 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 ASPAP45381 313 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 C1QBPQ07021 282 aaKnown RBP18.38■□□□□ 0.53
PCF11-207ENST00000624931 DSC3Q14574 896 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 SGSM1Q2NKQ1 1148 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 PHF13Q86YI8 300 aaPredicted RBP18.38■□□□□ 0.53
PCF11-207ENST00000624931 ALKBH8Q96BT7 664 aaKnown RBP18.38■□□□□ 0.53
PCF11-207ENST00000624931 ERP27Q96DN0 273 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 C9orf72Q96LT7 481 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 FRMD8P1Q9BZ68 369 aaPredicted RBP18.38■□□□□ 0.53
PCF11-207ENST00000624931 NIF3L1Q9GZT8 377 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 CRISPLD2Q9H0B8 497 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 SMYD3Q9H7B4 428 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 TLE6Q9H808 572 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 PLEKHA5Q9HAU0 1116 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 GOLGA2P5Q9HBQ8 144 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 SAYSD1Q9NPB0 183 aa18.38■□□□□ 0.53
PCF11-207ENST00000624931 R3HDM2Q9Y2K5 976 aaKnown RBP18.38■□□□□ 0.53
PCF11-207ENST00000624931 SMAPO00193 183 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 C2CD2LO14523 706 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 WEE2P0C1S8 567 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 TSHRP16473 764 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 AFF1P51825 1210 aaKnown RBP18.37■□□□□ 0.53
PCF11-207ENST00000624931 SOX4Q06945 474 aaPredicted RBP18.37■□□□□ 0.53
PCF11-207ENST00000624931 GRIK3Q13003 919 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 ZBTB6Q15916 424 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 HHATQ5VTY9 493 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 PLEKHA7Q6IQ23 1121 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 CENPUQ71F23 418 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 UBR7Q8N806 425 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 PAIP2Q9BPZ3 127 aaKnown RBP18.37■□□□□ 0.53
PCF11-207ENST00000624931 SDCBP2Q9H190 292 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 SHOC2Q9UQ13 582 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 CHKBQ9Y259 395 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 PCDHB4Q9Y5E5 795 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 SCN1AP35498 2009 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 SMIM28A0A1B0GU29 152 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 CCDC189A1A4V9 331 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 A6NHS1 94 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 LIASO43766 372 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 CD4P01730 458 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 TROVE2P10155 538 aaKnown RBP eCLIP18.37■□□□□ 0.53
PCF11-207ENST00000624931 KRT15P19012 456 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 PTPN4P29074 926 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms