RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 KCNK16Q96T55 309 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 NUSAP1Q9BXS6 441 aaKnown RBP11.64□□□□□ -0.55
LINC00963-214ENST00000622680 TRIM9Q9C026 710 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
LINC00963-214ENST00000622680 AGPAT3Q9NRZ7 376 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 EHD2Q9NZN4 543 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 NXF1Q9UBU9 619 aaKnown RBP11.64□□□□□ -0.55
LINC00963-214ENST00000622680 SPAARA0A1B0GVQ0 90 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 EIF3DO15371 548 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00963-214ENST00000622680 TULP3O75386 442 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 GABRG2P18507 467 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 YWHAQP27348 245 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 PPP3CCP48454 512 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 CASP4P49662 377 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 PGFP49763 221 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 SLC5A3P53794 718 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 CDH8P55286 799 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 LMAN2Q12907 356 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 ORC1Q13415 861 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 PSMD6Q15008 389 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 FAM26FQ5R3K3 315 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 C10orf76Q5T2E6 689 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 DDX42Q86XP3 938 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00963-214ENST00000622680 MIB1Q86YT6 1006 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 ETFBKMTQ8IXQ9 262 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 NUP93Q8N1F7 819 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 ZNF513Q8N8E2 541 aaPredicted RBP11.63□□□□□ -0.55
LINC00963-214ENST00000622680 KDF1Q8NAX2 398 aaPredicted RBP11.63□□□□□ -0.55
LINC00963-214ENST00000622680 ZCCHC14Q8WYQ9 949 aaKnown RBP11.63□□□□□ -0.55
LINC00963-214ENST00000622680 DHX58Q96C10 678 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 MED10Q9BTT4 135 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 XYLT2Q9H1B5 865 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 TNMDQ9H2S6 317 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 CD93Q9NPY3 652 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 KRT82Q9NSB4 513 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 GMIPQ9P107 970 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 CALCOCO1Q9P1Z2 691 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 CHORDC1Q9UHD1 332 aaPredicted RBP11.63□□□□□ -0.55
LINC00963-214ENST00000622680 PILRBQ9UKJ0 227 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 KLK13Q9UKR3 277 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 HCN2Q9UL51 889 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
LINC00963-214ENST00000622680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
LINC00963-214ENST00000622680 E2F8A0AVK6 867 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.62□□□□□ -0.55
LINC00963-214ENST00000622680 RTN3O95197 1032 aaPredicted RBP11.62□□□□□ -0.55
LINC00963-214ENST00000622680 HOXB2P14652 356 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 FAM193AP78312 1265 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 RPL6Q02878 288 aaKnown RBP11.62□□□□□ -0.55
LINC00963-214ENST00000622680 GAD2Q05329 585 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 STK38Q15208 465 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 ANO4Q32M45 955 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 HSF5Q4G112 596 aaPredicted RBP11.62□□□□□ -0.55
LINC00963-214ENST00000622680 EGFLAMQ63HQ2 1017 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 PAQR9Q6ZVX9 377 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 TMEM25Q86YD3 366 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 KIAA1958Q8N8K9 716 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 TERB1Q8NA31 727 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 PDZD8Q8NEN9 1154 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 ZNF507Q8TCN5 953 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 PLEKHO2Q8TD55 490 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 SCFD1Q8WVM8 642 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 GTPBP2Q9BX10 602 aaKnown RBP11.62□□□□□ -0.55
LINC00963-214ENST00000622680 SDCBP2Q9H190 292 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 SLC6A17Q9H1V8 727 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 KIAA1586Q9HCI6 787 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 SPHK2Q9NRA0 654 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 KBTBD4Q9NVX7 518 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 TBC1D14Q9P2M4 693 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 HMGXB4Q9UGU5 601 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 SH3BP1Q9Y3L3 701 aa11.62□□□□□ -0.55
LINC00963-214ENST00000622680 SMG1Q96Q15 3661 aaKnown RBP11.62□□□□□ -0.55
LINC00963-214ENST00000622680 ATP8B3O60423 1300 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 UBE4BO95155 1302 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 A0A0A0MRY4 1105 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 TBC1D3BA6NDS4 549 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 SRRM3A6NNA2 597 aaPredicted RBP11.61□□□□□ -0.55
LINC00963-214ENST00000622680 HOXC11O43248 304 aaPredicted RBP11.61□□□□□ -0.55
LINC00963-214ENST00000622680 BEST1O76090 585 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 CCDC130P13994 396 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 TNFRSF4P43489 277 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 NASPP49321 788 aaPredicted RBP11.61□□□□□ -0.55
LINC00963-214ENST00000622680 SIM1P81133 766 aaPredicted RBP11.61□□□□□ -0.55
LINC00963-214ENST00000622680 BIRC3Q13489 604 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 TRPC3Q13507 836 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 ZNF699Q32M78 642 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 HECTD3Q5T447 861 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 PEAR1Q5VY43 1037 aaPredicted RBP11.61□□□□□ -0.55
LINC00963-214ENST00000622680 BTBD8Q5XKL5 378 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 SLC23A3Q6PIS1 610 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 PIP4P1Q86T03 277 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 FUKQ8N0W3 1084 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 XXYLT1Q8NBI6 393 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 OVCA2Q8WZ82 227 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 SMARCD1Q96GM5 515 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 ACOX2Q99424 681 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 BLZF1Q9H2G9 400 aa11.61□□□□□ -0.55
LINC00963-214ENST00000622680 DMAP1Q9NPF5 467 aaPredicted RBP11.61□□□□□ -0.55
LINC00963-214ENST00000622680 DEC1Q9P2X7 70 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms