RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 FLT3P36888 993 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 CLCN4P51793 760 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 YWHAZP63104 245 aaKnown RBP18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 TWF1Q12792 350 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 MTMR3Q13615 1198 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 HFE2Q6ZVN8 426 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 SLFN11Q7Z7L1 901 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 KREMEN2Q8NCW0 462 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 SLC7A14Q8TBB6 771 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 RXFP2Q8WXD0 754 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 ZNF592Q92610 1267 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 GOLGA1Q92805 767 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 LCMT1Q9UIC8 334 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 HYOU1Q9Y4L1 999 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 C2CD4BA6NLJ0 364 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 CLASP2O75122 1294 aaKnown RBP18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 PROSCO94903 275 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 LTFP02788 710 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 GLI1P08151 1106 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 CASQ1P31415 396 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 ZNF252P-AS1Q0IIN9 211 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 VEPH1Q14D04 833 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 TRNP1Q6NT89 227 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 CCDC149Q6ZUS6 474 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 BHLHA9Q7RTU4 235 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 PEX26Q7Z412 305 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 FNIP1Q8TF40 1166 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 COMMD8Q9NX08 183 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 IL37Q9NZH6 218 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 MAGED2Q9UNF1 606 aaPredicted RBP18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 SCML2Q9UQR0 700 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 ALG6Q9Y672 507 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 RFXAPO00287 272 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 DAB1O75553 588 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 COMTP21964 271 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 ZNF143P52747 638 aaPredicted RBP18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 EPHB3P54753 998 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 PLD1Q13393 1074 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 PIGHQ14442 188 aaPredicted RBP18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 TAF12Q16514 161 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 ARCQ7LC44 396 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 DEFB106AQ8N104 65 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 FBXO32Q969P5 355 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 POPDC2Q9HBU9 364 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 USTQ9Y2C2 406 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 JRKLQ9Y4A0 524 aa18.66■□□□□ 0.58
PTCHD3-202ENST00000622555 ENC1O14682 589 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 PER2O15055 1255 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 CTIFO43310 598 aaKnown RBP18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 SPOPO43791 374 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 C8AP07357 584 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 CSH1P0DML2 217 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 CSH2P0DML3 217 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 SDC4P31431 198 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 ADGRD2Q7Z7M1 963 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 RBM23Q86U06 439 aaKnown RBP18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 CPNE8Q86YQ8 564 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 CFAP57Q96MR6 1250 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 SLC2A13Q96QE2 648 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 NAPGQ99747 312 aaPredicted RBP18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 GMIPQ9P107 970 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 AMFRQ9UKV5 643 aa18.65■□□□□ 0.58
PTCHD3-202ENST00000622555 A0A1W2PPC1 479 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 CTAGE9A4FU28 777 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 CAPN9O14815 690 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 FANCGO15287 622 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 NCK2O43639 380 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 LRG1P02750 347 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 DESP17661 470 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 MAN1A1P33908 653 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 MATKP42679 507 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 SLC1A1P43005 524 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 YWHAGP61981 247 aaKnown RBP eCLIP18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 TAF10Q12962 218 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 CCDC14Q49A88 953 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 DCAF6Q58WW2 860 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 BSPRYQ5W0U4 402 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 NT5DC3Q86UY8 548 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 NIPA2Q8N8Q9 360 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 CNPY3Q9BT09 278 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 TRIM62Q9BVG3 475 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 TTLL2Q9BWV7 592 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 EHD2Q9NZN4 543 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 PACSIN2Q9UNF0 486 aaPredicted RBP18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 TRIOBPQ9H2D6 2365 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 LAMA3Q16787 3333 aa18.64■□□□□ 0.57
PTCHD3-202ENST00000622555 A0A1W2PQH9 124 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 FAM92AA1XBS5 289 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 DPYSL4O14531 572 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 ATP1A1P05023 1023 aaKnown RBP18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 EPCAMP16422 314 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 SSR1P43307 286 aaKnown RBP18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 ATP11AP98196 1134 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 CDO1Q16878 200 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 LRIT3Q3SXY7 679 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 MEI1Q5TIA1 1274 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 DAB2IPQ5VWQ8 1189 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 SCD5Q86SK9 330 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms