RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 KCNK13Q9HB14 408 aa8.21□□□□□ -1.09
VPS11-209ENST00000622309 FKBP14Q9NWM8 211 aa8.21□□□□□ -1.09
VPS11-209ENST00000622309 CRNNQ9UBG3 495 aaPredicted RBP8.21□□□□□ -1.09
VPS11-209ENST00000622309 GNEQ9Y223 722 aaKnown RBP8.21□□□□□ -1.09
VPS11-209ENST00000622309 TNKSO95271 1327 aa8.21□□□□□ -1.09
VPS11-209ENST00000622309 FAM237BA0A1B0GVD1 139 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 PSMD11O00231 422 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 KLHL41O60662 606 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 CLASP2O75122 1294 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 TGDSO95455 350 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 CSF1RP07333 972 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 DLDP09622 509 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 HMGB2P26583 209 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 STAT1P42224 750 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 MAGEA4P43358 317 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 ACADSBP45954 432 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 RALGDSQ12967 914 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 EIF2B5Q13144 721 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 CCNIQ14094 377 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 LLGL1Q15334 1064 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 ZYXQ15942 572 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 CYP1B1Q16678 543 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 USP41Q3LFD5 358 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 SLC27A3Q5K4L6 730 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 RNF19BQ6ZMZ0 732 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 GLYCTKQ8IVS8 523 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 ELMOD1Q8N336 334 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 C1orf54Q8WWF1 131 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 C12orf43Q96C57 262 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 VPS11Q9H270 941 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 NCANO14594 1321 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 A0A1W2PPM1 405 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 TCRBV7S2A1N4TA0A589 114 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 PRDX6P30041 224 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 AP3M2P53677 418 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 IST1P53990 364 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 ALDH18A1P54886 795 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 SLC25A3Q00325 362 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 TFAP4Q01664 338 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 MOGQ16653 247 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 HP1BP3Q5SSJ5 553 aaPredicted RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 IFIT1BQ5T764 474 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 TWF2Q6IBS0 349 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 NOP9Q86U38 636 aaKnown RBP8.21□□□□□ -1.1
VPS11-209ENST00000622309 RTKN2Q8IZC4 609 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 ZDHHC14Q8IZN3 488 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 PQLC1Q8N2U9 271 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 GLIS3Q8NEA6 775 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 RASGRP4Q8TDF6 673 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 RANBP9Q96S59 729 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 ZSWIM1Q9BR11 485 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 ZFYVE28Q9HCC9 887 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 CD209Q9NNX6 404 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 EBF1Q9UH73 591 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 GTF3C4Q9UKN8 822 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 ERGIC3Q9Y282 383 aa8.21□□□□□ -1.1
VPS11-209ENST00000622309 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 ARPC4-TTLL3A0A0A6YYG9 625 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 MYMKA6NI61 221 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 A6NL46 340 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 AP3B1O00203 1094 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 LAD1O00515 517 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 TYROBPO43914 113 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 PDE8AO60658 829 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 ATG7O95352 703 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 DLATP10515 647 aaKnown RBP8.2□□□□□ -1.1
VPS11-209ENST00000622309 NR4A1P22736 598 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 ADSLP30566 484 aaPredicted RBP8.2□□□□□ -1.1
VPS11-209ENST00000622309 KRT6CP48668 564 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 MARCKSL1P49006 195 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 CASP5P51878 434 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 TRIM28Q13263 835 aaKnown RBP8.2□□□□□ -1.1
VPS11-209ENST00000622309 DLGAP5Q15398 846 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 TBCCQ15814 346 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 PCSK7Q16549 785 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 KRT80Q6KB66 452 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 CHPFQ8IZ52 775 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 BBOF1Q8ND07 529 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 ISOC1Q96CN7 298 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 COQ7Q99807 217 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 C1orf21Q9H246 121 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 HIPK3Q9H422 1215 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 TJP1Q07157 1748 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 BAZ2BQ9UIF8 2168 aaKnown RBP8.2□□□□□ -1.1
VPS11-209ENST00000622309 A8MU76 341 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 CAPN14A8MX76 684 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 CENPBD1B2RD01 187 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 TSPAN9O75954 239 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 MYO1DO94832 1006 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 CALM1P0DP23 149 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 CALM2P0DP24 149 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 CALM3P0DP25 149 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 COL6A1P12109 1028 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 TNFAIP3P21580 790 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 ALDH3B2P48448 385 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 KCNC4Q03721 635 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 FUT2Q10981 343 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 MESDQ14696 234 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 C15orf59Q2T9L4 293 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms