RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 IPMKQ8NFU5 416 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 PPWD1Q96BP3 646 aaKnown RBP13.75□□□□□ -0.21
SIRPA-204ENST00000622179 SPON2Q9BUD6 331 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 RPTORQ8N122 1335 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 SHOX2O60902 331 aaPredicted RBP13.75□□□□□ -0.21
SIRPA-204ENST00000622179 LRRC38Q5VT99 294 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 KLC3Q6P597 504 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 FAM183BPQ6ZVS7 135 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 UBXN6Q9BZV1 441 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 UBP1Q9NZI7 540 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 ANGPTL2Q9UKU9 493 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 GRID1Q9ULK0 1009 aa13.75□□□□□ -0.21
SIRPA-204ENST00000622179 O00370 1275 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 SNX3O60493 162 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 PCSK1P29120 753 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 CPT1AP50416 773 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 FAAP100Q0VG06 881 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 PABPC5Q96DU9 382 aaKnown RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 THTPAQ9BU02 230 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 SLC38A7Q9NVC3 462 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 GRHL1Q9NZI5 618 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 TMEM59LQ9UK28 342 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 KCNK1O00180 336 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 MMP13P45452 471 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 STX1BP61266 288 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 SLC6A3Q01959 620 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 SLC12A1Q13621 1099 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 USP10Q14694 798 aaKnown RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 KBTBD12Q3ZCT8 623 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 TRIM67Q6ZTA4 783 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 NETO2Q8NC67 525 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 NLGN2Q8NFZ4 835 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 ATXN2LQ8WWM7 1075 aaKnown RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 TFAP2BQ92481 460 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 EDEM1Q92611 657 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 NIFKQ9BYG3 293 aaKnown RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 FRMD8Q9BZ67 464 aaPredicted RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 ABHD16BQ9H3Z7 469 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 MTO1Q9Y2Z2 717 aaKnown RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 BNIP3LO60238 219 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 MYL2P10916 166 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 CASP2P42575 452 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 PRAMEP78395 509 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 ZC3H12AQ5D1E8 599 aaKnown RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 KCNT2Q6UVM3 1135 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 SP110Q9HB58 689 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 KRT82Q9NSB4 513 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 CASTOR2A6NHX0 329 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 VNN1O95497 513 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 UNGP13051 313 aaPredicted RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 CPB1P15086 417 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 TKTL1P51854 596 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 ACVR2BQ13705 512 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 FSCBQ5H9T9 825 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 RAB44Q7Z6P3 723 aaPredicted RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 UNC45BQ8IWX7 931 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 ATPAF2Q8N5M1 289 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 SLC26A7Q8TE54 656 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 CENPTQ96BT3 561 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 L3MBTL3Q96JM7 780 aaPredicted RBP13.74□□□□□ -0.21
SIRPA-204ENST00000622179 TMEM237Q96Q45 408 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 FIZ1Q96SL8 496 aa13.74□□□□□ -0.21
SIRPA-204ENST00000622179 SDR42E2A6NKP2 422 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 STRNO43815 780 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 OCRLQ01968 901 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 FSTL1Q12841 308 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 CES3Q6UWW8 571 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 DEFB106AQ8N104 65 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 COLGALT1Q8NBJ5 622 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 SKA2Q8WVK7 121 aaPredicted RBP13.73□□□□□ -0.21
SIRPA-204ENST00000622179 CKAP2Q8WWK9 683 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 TASP1Q9H6P5 420 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 RXFP1Q9HBX9 757 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 SLCO1B3Q9NPD5 702 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 SLC39A10Q9ULF5 831 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 DRG1Q9Y295 367 aaKnown RBP13.73□□□□□ -0.21
SIRPA-204ENST00000622179 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 MYH15Q9Y2K3 1946 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 CREB1P16220 341 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 BEX3Q00994 111 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 RGS9BPQ6ZS82 235 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 LMO3Q8TAP4 145 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 ATP6V1E2Q96A05 226 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 GBA2Q9HCG7 927 aaPredicted RBP13.73□□□□□ -0.21
SIRPA-204ENST00000622179 PRG3Q9Y2Y8 225 aaPredicted RBP13.73□□□□□ -0.21
SIRPA-204ENST00000622179 SPRP35270 261 aaPredicted RBP13.73□□□□□ -0.21
SIRPA-204ENST00000622179 THPOP40225 353 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 ZNF143P52747 638 aaPredicted RBP13.73□□□□□ -0.21
SIRPA-204ENST00000622179 PPIL2Q13356 520 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 CUL3Q13618 768 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 FAM182AQ5T1J6 154 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 ACAD11Q709F0 780 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 IFT43Q96FT9 208 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 ANKRD36CQ5JPF3 1778 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms